Gene Namu_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4221 
Symbol 
ID8449847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand+ 
Start bp4672754 
End bp4673356 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content66% 
IMG OID645043270 
ProductGtrA family protein 
Protein accessionYP_003203499 
Protein GI258654343 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00539121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.100655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTCA TCGATTCAGT CCGGCAGCAC CTGCCTGTCA AGTACCGGGA ACTCGCGAAG 
TTCCTGGTCG TCGGGGGCAC CAGCTACGTC GTCGACGTCG GCCTGTTCAG CCTGCTCTCG 
CACACCGTGC TGTCCGACAA GGTCGTCACG GCCAAGGGCA TCTCGGTCAT CGTGGCCACC 
ATTCTGAGCT ACATCCTGAA CCGGGAATGG TCGTTCAACA GCCGCGGCGG CCGCGAACGC 
CATCACGAGG CCATGCTGTT CTTCGTGGTC AACGGCATTG CCCTGGGATT GAATCTGGTC 
CCGCTCGCGG TCTCGCAGTA CATCTTCGGC ATCAACACCG CCAACTACTC CAGCCTGACC 
GTCACGATCG CCAACTTCGT CTCGGCGAAC GTCATCGGCA CCGCGCTGGG CATGGCCTTC 
CGCTTCTGGG CCTACCGCAA GTGGGTCTTC CCGGAGGAGC TCAACCCGCA CCCGGAGATC 
GTGGCCACCG AGCTGGCCGC CCAGGCGGCG GTCGAGGCCC CGGTCACCGA GCGCATCCCC 
GAGCAGCCCC TGCGCTCCGA TACCGCCGAG TACTTGCCCG GCGCCGGGCG ATCCCGCAGC 
TGA
 
Protein sequence
MALIDSVRQH LPVKYRELAK FLVVGGTSYV VDVGLFSLLS HTVLSDKVVT AKGISVIVAT 
ILSYILNREW SFNSRGGRER HHEAMLFFVV NGIALGLNLV PLAVSQYIFG INTANYSSLT 
VTIANFVSAN VIGTALGMAF RFWAYRKWVF PEELNPHPEI VATELAAQAA VEAPVTERIP 
EQPLRSDTAE YLPGAGRSRS