Gene Namu_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4215 
Symbol 
ID8449841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4660446 
End bp4661849 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content74% 
IMG OID645043264 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003203493 
Protein GI258654337 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.251159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.128113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGC CGCCACCCGG TGACGCGGCG GCCGCGCCCC GGGTGGCCGG GCCGGGCCCG 
TTTCGCCGGT TGCTGGTCGC GACCACCTCG GCCAACCTGG CCGACGGGCT GATGGTGGTC
GCGGTGCCCT GGCTGGCCTC GGCGATCACC CGCGACCCGG TGTCGATCGC GCTGGTCACG
GCGGCCACCC GGTTGCCCTG GCTGCTGTTC TCCCTGCCGG TCGGGGCGAT CACCGACCGG
TTCGACCGGC GGCGGCTGGT CGGTCTCGCG GCCACGGCGC GCGCGGTGCT GTTGCTGGGG
TTCGCGCTGC TGCTGGTGGC CGTCGGTGCG CCCGCCGCGG ATCCGTCGGC CGGCGCGGAT
CCGGCGGCCG GCGCGGGGAC CGGCACGGTG GCCGGCGGCG ACCACTCCGG GGTCCTGCTG
GCCGGGCTCG TCGTCCTGGC CCTGCTGGTC GGCCTGGCCG AGGTGGTCGG GGACAACAGT
GCACAGACGC TGATCCCGTC CCTGGTTCCT GAGCAACGGT TGACCACCGC GAACGGGCGG
CTGTGGGCGG CCGAGACCGT CGCCAACCAG TTCGTCGGCC CGCCCCTGGC CGGTCTGCTG
ATCGCGGTCG GCATCGCCCT GCCGTTCTTC GTCGGCGCCG GCGGGTTCGC CGTGGCCGCG
GCCATGGTGT TCACCATCGC CGGCTCGTTC CGGCCACCCC GTTCGGACGG CCCGCCGACC
CGGCTGTCGG CCGAGATCGC CGAGGGCGTC CGCTGGCTGA TGGGTCACCG CCTGCTGCGC
TCGCTGGCCA TCTCGCTGGG CGTGCTCAAT GCGGCCAGTG CCATGGGTGC GGCCGTGTTC
GTGCTGTTCG GGCAGGAGGT GGCCGGGTTG GACGCCACCG GATTCGGCCT GCTGATGACG
GGCTCGGCGG TCGGCGCCGT GCTCGGCGGG ATCGCCGGCC CCCGGCTGAT CCGGCGCTGG
CCGCCCGGCA CGGCGTTGGC GGCGGCGATC GTGGGCATGG GCGCCGGCGA TCTGCTGTTC
GGGCTGCTGT CACAGTTCGC CGCGCTCTGG GCGGTCAGTC TGGTGACCGC CGTGTTCATC
GTGGTCTGGA ACGTGATCAC GGTGTCGCTG CGTCAGTCGC TGATCCCGGA TCGACTGCTC
GGCCGGGTCA ACTCGGTGTA CCGGTTCTTC GGCTGGGGCA CGATCGCGAT CGGCACGCTG
CTGGGCGGGC TGGTGGTCTG GGCGTTCGAG CCGGTCGTCG GCCGGGAATG GGCCGTGCGG
CTGCCGTTCC TGCTGTGCGG GCTCAGCTAC CTGCTGTTGC TCGCCTGGGC GTGGCCGCGG
ATCAACAACG AGCAGATCGC CCGAGCCCGG GCGCAGGCCG GTGAGGGGGG AGCAGCCGGA
GCGGACGGGC CCCTGGCGAG ATAA
 
Protein sequence
MTVPPPGDAA AAPRVAGPGP FRRLLVATTS ANLADGLMVV AVPWLASAIT RDPVSIALVT 
AATRLPWLLF SLPVGAITDR FDRRRLVGLA ATARAVLLLG FALLLVAVGA PAADPSAGAD
PAAGAGTGTV AGGDHSGVLL AGLVVLALLV GLAEVVGDNS AQTLIPSLVP EQRLTTANGR
LWAAETVANQ FVGPPLAGLL IAVGIALPFF VGAGGFAVAA AMVFTIAGSF RPPRSDGPPT
RLSAEIAEGV RWLMGHRLLR SLAISLGVLN AASAMGAAVF VLFGQEVAGL DATGFGLLMT
GSAVGAVLGG IAGPRLIRRW PPGTALAAAI VGMGAGDLLF GLLSQFAALW AVSLVTAVFI
VVWNVITVSL RQSLIPDRLL GRVNSVYRFF GWGTIAIGTL LGGLVVWAFE PVVGREWAVR
LPFLLCGLSY LLLLAWAWPR INNEQIARAR AQAGEGGAAG ADGPLAR