Gene Namu_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4189 
Symbol 
ID8449815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4625973 
End bp4626998 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID645043238 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003203467 
Protein GI258654311 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAG TTCTGGTCAG CGGTTCGGCC GGGTTCATTG GCGGCTACGT CGTTGAGGAG 
TTGCTGCGCC GAGGATATTC GGTGGTTGGT GTGGACAACT ATTCAAAGTA CGGGCCGGTC
GTCAAGTCGT ACGACGACAA TCCCAACTAT AACTTAATTA AGGGCGATGT GCAGGATACC
GAGCTGATGA CGGAGCTGCT GCTGGATTGC GAGCATTTCA TCGCAGGCGC TGCGTTGATC
GGCGGCATCT CCTACTTCCA CACCTATGCC TACGACCTGC TGGCGCAGAA CGAGCGGATC
ATCGCCTCAT CCTGTGATGC GGCGATCACC GCGCACAAGT CGGGCAAATT GAGCAAGGTG
ACGTACATGT CGTCCTCGAT GGTGTTCGAA TCAACGACCA CGTGGCCCTC GCAGGAGGGC
GACGAACGCA AGGTTCCGCC ACCGCTGTCC TCCTACGGTT TTCAGAAACT GGCCGTCGAG
TACTTCGCCC GCGCAGCATG GGATCAGTAC AAGCTGCCCT ACACGATTCT GCGGCCGTTC
AATTGCGTCG GCATCGGCGA ATCCCGCGCC CTTGGTGACG TGGAGATCGA CTCGGGCAAC
GTGAAGCTGG CCATGAGTCA CGTGGTCCCG GACCTGGTGC AAAAGGTGCT CAAGGGCCAG
GACCCGCTGC ACATCCTGGG CGAGGGCAAC CAGATCCGGC ACTACACGTA CGGAGGTGAC
TTGGCCCGCG GGATCGTCGA TGCGATGGCC CACCCAAAGG CCCTCAATGA CGATTTCAAC
CTTTCGACCC CGACCGGACA CACGGTGACC GAGCTGGCGC AAATCATCTG GACGAAGATC
AAGGGCCCGG AGGTGTTCAT GAACCTGGTC CACGATCCGG CCTTCGAGTA CGACGTGCAG
CGTCGGGTTC CGGCTACCGA CAAGGCCCGC GATATCTTGG GTTTTCAGGC GGAAACGACG
CTTGAGGACA TGCTCGACGA GGTCATTCCA TGGATCGAAC AAGCCATGAA GGACGGCACC
ATCTGA
 
Protein sequence
MEKVLVSGSA GFIGGYVVEE LLRRGYSVVG VDNYSKYGPV VKSYDDNPNY NLIKGDVQDT 
ELMTELLLDC EHFIAGAALI GGISYFHTYA YDLLAQNERI IASSCDAAIT AHKSGKLSKV
TYMSSSMVFE STTTWPSQEG DERKVPPPLS SYGFQKLAVE YFARAAWDQY KLPYTILRPF
NCVGIGESRA LGDVEIDSGN VKLAMSHVVP DLVQKVLKGQ DPLHILGEGN QIRHYTYGGD
LARGIVDAMA HPKALNDDFN LSTPTGHTVT ELAQIIWTKI KGPEVFMNLV HDPAFEYDVQ
RRVPATDKAR DILGFQAETT LEDMLDEVIP WIEQAMKDGT I