Gene Namu_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4173 
Symbol 
ID8449799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4608005 
End bp4608763 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID645043222 
Productpeptidase M50 
Protein accessionYP_003203451 
Protein GI258654295 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.917374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAT CCCCCGGTGG CAGCTGGATC TTTCCCGTCA TCGTGCTCGT CACGGCGGGC 
GCCGGCGTCG CCGCGCAAGC CTCGACCCGT TCGTCCGGGT GGTTGGGCGT CCCCGTCGAG
GTCTGGGTGT TCCTGGTGGT GCTCGGCGGC TGGGTCATCA CGCTGTGCCT GCACGAGTTC
GCCCACGCCC TGGTCGCCTA CGTCGGCGGG GACACCTCGG TGCGGGCCCG CGGGTACCTG
ACTTTGAACC CGGCCCGGTA CACCGACCTG GCCACCTCGG TGATCATGCC GATCATCCTG
CTGGCGGTGG GCGGCATTCC CCTGCCCGGT GGCGCGGTGC TGGTCGAGCC GGGCCGGTTG
CGCCGGCGCT GGTTCGCCAG CCTGGTCTCG GCCGCCGGTC CGCTGACCAA CGTCGTCGCC
GGGGTGGTGC TGGCCGTGGT CGCGGCGCCG ATCTCCTCGC CGCTGGGCGC GGCCCTGTCC
TACCTGGCCC TGCTGCAGTT CGTCGCCGGC ATCCTGAACA TCCTGCCGAT CCCCGGCTTC
GACGGGTTCG GCGTCCTGGA GCCGTACCTC TCGCCCCGGT TCACCGAGCG GCTGCGGCCG
GCCCGGCCGT GGATTCCGCT GGTCGCCTTC ATCATCCTGT TCTCGGTCCC GCAGGCCAGC
CGGGCGCTGT TCGGCGCGGC CAACGAGCTG TTCGTCTGGG CGGGCGGCAA CACCGCGCTG
GCCGCCATCG GCTCGAGCCT GTTCCGGTTC TGGGCCTGA
 
Protein sequence
MAKSPGGSWI FPVIVLVTAG AGVAAQASTR SSGWLGVPVE VWVFLVVLGG WVITLCLHEF 
AHALVAYVGG DTSVRARGYL TLNPARYTDL ATSVIMPIIL LAVGGIPLPG GAVLVEPGRL
RRRWFASLVS AAGPLTNVVA GVVLAVVAAP ISSPLGAALS YLALLQFVAG ILNILPIPGF
DGFGVLEPYL SPRFTERLRP ARPWIPLVAF IILFSVPQAS RALFGAANEL FVWAGGNTAL
AAIGSSLFRF WA