Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4173 |
Symbol | |
ID | 8449799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4608005 |
End bp | 4608763 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645043222 |
Product | peptidase M50 |
Protein accession | YP_003203451 |
Protein GI | 258654295 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.917374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAT CCCCCGGTGG CAGCTGGATC TTTCCCGTCA TCGTGCTCGT CACGGCGGGC GCCGGCGTCG CCGCGCAAGC CTCGACCCGT TCGTCCGGGT GGTTGGGCGT CCCCGTCGAG GTCTGGGTGT TCCTGGTGGT GCTCGGCGGC TGGGTCATCA CGCTGTGCCT GCACGAGTTC GCCCACGCCC TGGTCGCCTA CGTCGGCGGG GACACCTCGG TGCGGGCCCG CGGGTACCTG ACTTTGAACC CGGCCCGGTA CACCGACCTG GCCACCTCGG TGATCATGCC GATCATCCTG CTGGCGGTGG GCGGCATTCC CCTGCCCGGT GGCGCGGTGC TGGTCGAGCC GGGCCGGTTG CGCCGGCGCT GGTTCGCCAG CCTGGTCTCG GCCGCCGGTC CGCTGACCAA CGTCGTCGCC GGGGTGGTGC TGGCCGTGGT CGCGGCGCCG ATCTCCTCGC CGCTGGGCGC GGCCCTGTCC TACCTGGCCC TGCTGCAGTT CGTCGCCGGC ATCCTGAACA TCCTGCCGAT CCCCGGCTTC GACGGGTTCG GCGTCCTGGA GCCGTACCTC TCGCCCCGGT TCACCGAGCG GCTGCGGCCG GCCCGGCCGT GGATTCCGCT GGTCGCCTTC ATCATCCTGT TCTCGGTCCC GCAGGCCAGC CGGGCGCTGT TCGGCGCGGC CAACGAGCTG TTCGTCTGGG CGGGCGGCAA CACCGCGCTG GCCGCCATCG GCTCGAGCCT GTTCCGGTTC TGGGCCTGA
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Protein sequence | MAKSPGGSWI FPVIVLVTAG AGVAAQASTR SSGWLGVPVE VWVFLVVLGG WVITLCLHEF AHALVAYVGG DTSVRARGYL TLNPARYTDL ATSVIMPIIL LAVGGIPLPG GAVLVEPGRL RRRWFASLVS AAGPLTNVVA GVVLAVVAAP ISSPLGAALS YLALLQFVAG ILNILPIPGF DGFGVLEPYL SPRFTERLRP ARPWIPLVAF IILFSVPQAS RALFGAANEL FVWAGGNTAL AAIGSSLFRF WA
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