| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4100 |
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| Symbol | |
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| ID | 8449723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4527765 |
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| End bp | 4528598 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645043146 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_003203378 |
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| Protein GI | 258654222 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.231752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0287781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCG GCAAGACGAC ACTGATCGCG CACCTGGGCT ACCCGACCTT TGCCTTCAAG
GCGCCGTTGA TCTACAACCC GTGGTTCGAC AAGAACGACA TCGACGCGGT TGTGGTGCCC
ATGGGGGTCA AGCCCGAGGA GTACCGGGAG TTCTTCCCGC TGCTGTTCAA GATGTCCAAC
ATCCGCGGTG CGCTGGTCAC CATGCCGCAC AAGGTGACCA CGACCGAGCT GGTCGACGAG
CTCACCCCGA TCGCCCAGGT GGCCGGCGCG GCCAACGCCG TGCTGCTGCG CGAGGACGGC
TCGCTGCTGG GCGATCAGTT CGACGGCGCC GGCTTCGCCC GCGGGGTGGC CCGCAAGGGC
TTCGACGTCA CCGGCAAGCG GGCCCTGGTG GTCGGCAACG GGGGGGTCGG CTCGCCCATC
GCGGCGTCCC TGGTCGCCGA CGGGCTGGCC GAGATCGGTT TGTACGACCC GAACATCAAA
GCCTCCGAAG CCCTGGCCGA GCGGTTGAAC CAGCACTACC CGGCGGTGAA GGTGACCATC
GGCTCCAAGG ATCCCGACGG CTTCGACCTG GTGGCCAACG CGACCCCGCT GGGCATGCAG
GACGGCGACC CGCTACCCGT GGACGTCGAT CGGATCGCGC CGGGGACGTT CGTCGCCGAC
GTGGTGATGA AGCAGACCAT CACGCCGTTC CTGCAGGCCG CGCTGGACAA GGGCTGTCCC
ATCCAGATCG GTACCGACAT GCTCTACGAG CAGATCCCGG CCTACCTGGA GTTCTTCGGC
TTCGGCACCA CCACCGCCGA CGAGCTTCGT GAAACCTCGT TGATCCAGCC ATGA
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| Protein sequence | MISGKTTLIA HLGYPTFAFK APLIYNPWFD KNDIDAVVVP MGVKPEEYRE FFPLLFKMSN
IRGALVTMPH KVTTTELVDE LTPIAQVAGA ANAVLLREDG SLLGDQFDGA GFARGVARKG
FDVTGKRALV VGNGGVGSPI AASLVADGLA EIGLYDPNIK ASEALAERLN QHYPAVKVTI
GSKDPDGFDL VANATPLGMQ DGDPLPVDVD RIAPGTFVAD VVMKQTITPF LQAALDKGCP
IQIGTDMLYE QIPAYLEFFG FGTTTADELR ETSLIQP
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