| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4040 |
|---|
| Symbol | |
|---|
| ID | 8449659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4453894 |
|---|
| End bp | 4454796 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645043085 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003203321 |
|---|
| Protein GI | 258654165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0557153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.034342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG ACCGGGCCGC ACTGGCCGGC TTTCTGCGGC GCCACCGGGA ATCGCTGCAG
CCGGAGGACG TCGGCCTGCC CCGCGGGCGC CGCCGGCGGA CGCAGGGGCT GCGCCGCGAG
GAGGTCGCCG CGCTCTGCCA CATGTCGACC GACTACTACG CACGGATGGA ACAGGAGCGT
GGCCCCCAGC CGTCGGAGCA GATGACGGCG GCCATCGCCC AAGGCCTGCA CCTCTCGCTC
GACGAGCGGG ACCACCTGTT CCGGCTGGCC GGGCACCATC CGCCGACCCG CGGGGCGGCC
AGCGACTACA TCGGGCCCGG CATGCTGCGC ATCTTCGACC GGCTGCAGGA CACGCCGGCC
GAGATCGTCA CCGAGCTCGG GGAGACGCTG CGGCAGACCC CGTTGGCGGT GGCCCTCACC
GGCGATCTGA CCGTCTACCG CGGCCCGGCC CGCAGCATCG GCTACCGGTG GTTCACCGAC
CCGGCGATGC GCCGGCGGTA CGCCCCCGAG GACCACGAGT TCCTCTCCCG GATGTTCGCC
TCTGGCCTGC GCGAGGCGAT CGCATTGCGT GGCAACGGCT CTCGGGCCGC GCAGCTGGCC
GAGCTGCTGC TCGCCGGCAG CGCGGAGTTT CGGGCGGTCT GGGCCCGGCA CGAGGTCGGC
ATCCGGCCCC GGGAGGTCAA GCACTTCGTG CACCCCGAAC TCGGCGCGAT GGAGCTGACC
TGCCAGACGC TGCTCGATCC GCAGCAGTCG CAGATGCTGC TCGTCTACAC CGCCGTCCCG
GGCAGCGAGA CCCACGAGAA GCTGCAGCTG CTGTCCGTCA TCGGTACCCA GGTCCTGACC
GACCCGGACG CCGGCCGCGA TCAGCCCGTG CCGGATACAC CGTCGGGTCG GACCGCCCGG
TAG
|
|---|
| Protein sequence | MTIDRAALAG FLRRHRESLQ PEDVGLPRGR RRRTQGLRRE EVAALCHMST DYYARMEQER
GPQPSEQMTA AIAQGLHLSL DERDHLFRLA GHHPPTRGAA SDYIGPGMLR IFDRLQDTPA
EIVTELGETL RQTPLAVALT GDLTVYRGPA RSIGYRWFTD PAMRRRYAPE DHEFLSRMFA
SGLREAIALR GNGSRAAQLA ELLLAGSAEF RAVWARHEVG IRPREVKHFV HPELGAMELT
CQTLLDPQQS QMLLVYTAVP GSETHEKLQL LSVIGTQVLT DPDAGRDQPV PDTPSGRTAR
|
|---|
| |