| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3982 |
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| Symbol | |
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| ID | 8449601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4397062 |
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| End bp | 4397907 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645043027 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003203263 |
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| Protein GI | 258654107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0054397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0200465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCCG CCCCCTCCGC CCCCGCCGAT TCCGACGGGC CCATTTTCCT CAAGGGGCAC
GGCACCGAGA ACGACTTCGT CCTGCTGCCC GACCGCGCGG ACGAGCTGGA TCTGACCGAG
AACCGCGTCC GCGCCCTGTG TGACCGCCGG GCCGGGCTGG GCGGGGACGG GGTGATCCGG
GTGGTGCCGG ACGCCGACGG CGGGTTCTTC ATGGACTACC GCAACGCCGA CGGATCGCTG
GCCCAGATGT GCGGCAACGG CGCCCGGCTG TTCGCTCGCT ACATGGTCGA CGCCGGCTGG
GCCGCGCCCG GCCGCATCCC GTTCCGCACT CGCGGCGGCC CCCGGGTGGC CCATGTGCAG
ACCAGCGGCG ACGTCTCGAT CGAGATGGGA CCGGCCACCC TGGGCGTCGC CTCCCGGGCG
GCGATCGGCG ATGCGGCATT CGCCGGGATC GCGGTGGACG TCGGCAATCC GCACCTGGTC
TGCCTGGACA TCGGCGACCG GTCGACCTTG GCCGCGCTGG ACCTGAGCCA CGCGCCCGAA
TTCGATCCGC AGGTCTTCCC CGACGGGGTG AACATCGAGT TCGTCACCGC GCAGGGCCCG
GGCGAGGTGG CCATGCGGGT GCACGAGCGT GGGGTGGGAG AGACCCGTTC GTGCGGGACC
GGCACCGTCG CCGTGGCCGC GGCCACGCTG GCCGCGGCCG GGCGGACGCA GGGCCGCGTC
CTGGTCAACG TGCCGGGCGG CCAGGTCACG GTGGACATCG CCCCCGGCAC CTCGATGTTG
ACCGGCCCCG CGGTGATCGT GGCCCAGGGT CGGGTGGAAC CGCAGTTCTG GGCCGCCCAC
CGCTGA
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| Protein sequence | MPAAPSAPAD SDGPIFLKGH GTENDFVLLP DRADELDLTE NRVRALCDRR AGLGGDGVIR
VVPDADGGFF MDYRNADGSL AQMCGNGARL FARYMVDAGW AAPGRIPFRT RGGPRVAHVQ
TSGDVSIEMG PATLGVASRA AIGDAAFAGI AVDVGNPHLV CLDIGDRSTL AALDLSHAPE
FDPQVFPDGV NIEFVTAQGP GEVAMRVHER GVGETRSCGT GTVAVAAATL AAAGRTQGRV
LVNVPGGQVT VDIAPGTSML TGPAVIVAQG RVEPQFWAAH R
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