| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3859 |
|---|
| Symbol | |
|---|
| ID | 8449478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4230137 |
|---|
| End bp | 4231189 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645042907 |
|---|
| Product | cobalamin synthesis CobW domain protein |
|---|
| Protein accession | YP_003203143 |
|---|
| Protein GI | 258653987 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0885054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCCG TCGTCGTGCT GGCCACCGTC GACCCCGTGC TGCGGGAGAC GGCCGTGCTG
TCCTGGCTGA CCGACCGGCC CGGAACCGGA GTGCTGCGCC AGGACCTGGA TCCCGAGGCG
GGCATGCTGC GCCGGGTGGT CGGCGACGAA CACGGCGTGG TCGAGGATCG CAGCCGCCCG
GCGGACCGCG GCTGCCCCGG ATGCGTGCTG CGGGAGAACG CGCTGCCCGC CGTCGCCGCG
ATGGTCAAGT CCGGCCGGTG GCAACGGATC GTGGTGGCCC TTCCGGTGTC GGCGGCCTCC
GTCCCGGCGT CCCGGCCACT GGCCGACCCG TTCGCGCGGC GCCGGCTGGG CATCGAACTG
GCCACCGTGG TCAGTGTGGT CGACGTGGAC CGGGTCGAGG ACGACCTGAT GGGCGACGAG
CGGGTCGGGC AGCGGGGCGG GGCGCTGGCC GTCGGGGACC GCCGGTCGGT CGGCGAGGCC
CTGGCCGCCC AGCTCGGGCA TGCCGATCTG GTGCTGACCA CCGGGAGCAA CCCGGTCGGG
CTGACCCTGG TCGACCATCT GCGCGGTATC CGCAGTGCCC GCCGCGAGCT GCACCAGACC
CGGGTGGCTG AGTTGTTCGC CGCCCGGCAC TCGGCCCGCT CGGCCGCGGC CCGGCTGGAC
CCGCGAACGC TGCAGCCGTC GAGCGTGCCC GACGCGCACG GGGTCTGGAC GCTCGACCTG
GTCAGCCACC GGCCGATGCA CCCCGAGCGG ATCATGGCCC GGCTGGCCGA CCTGGCCGGC
GGCCGGGTGC GCGCCCGGGG CCGGTTCCAG GTGCCGACCC GGGCGGGCCG GCTGGCCGTG
CTCGACGGCG CCGGCGGGCA CCTGTCGATC GGCGACGCCG GCCGGCCGGC CACCGCGGTC
GGGACCCGGG TGCTGCTCAC CGGTACCGGC CCCGAGCGCG CCCAGCGGCG CCAGGTGTTC
GCCGAGATGC TGCTCACCGA CGACGAACTC GCCTCCGGCC GGGACTGGTC GACCGTTGAT
GACGGCCTGG ACGACTGGCT CGGGCCCCGG TAG
|
|---|
| Protein sequence | MIPVVVLATV DPVLRETAVL SWLTDRPGTG VLRQDLDPEA GMLRRVVGDE HGVVEDRSRP
ADRGCPGCVL RENALPAVAA MVKSGRWQRI VVALPVSAAS VPASRPLADP FARRRLGIEL
ATVVSVVDVD RVEDDLMGDE RVGQRGGALA VGDRRSVGEA LAAQLGHADL VLTTGSNPVG
LTLVDHLRGI RSARRELHQT RVAELFAARH SARSAAARLD PRTLQPSSVP DAHGVWTLDL
VSHRPMHPER IMARLADLAG GRVRARGRFQ VPTRAGRLAV LDGAGGHLSI GDAGRPATAV
GTRVLLTGTG PERAQRRQVF AEMLLTDDEL ASGRDWSTVD DGLDDWLGPR
|
|---|
| |