Gene Namu_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3834 
Symbol 
ID8449453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4208602 
End bp4209228 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID645042884 
Producthypothetical protein 
Protein accessionYP_003203120 
Protein GI258653964 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0388523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.180061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCG ACGTCGCACC CAGACCCACC ACCCGGGCCG CCGCCGGGAT CTCGGCCGCC 
GACCCGGGGC TCATCGGCCT GCTCGGGTTC GTGCTGGCCA CCCTGACCGC CCAACTGGAG
CACCTGGGCG TGCAGAACGA GGGACCCGTG TTCTGGGTCG GCGCCGTCTT CGGCGGCGTG
GTCCAGGTGA CCGCCGGGAT GCTGTCCTAC TTCAAGGGGG ACAACTTCCA TTTCGTCGTC
TACAACGCAT TCGGCTGGTA CTGGATCGTG GTTCCCGGTT TCCTGCTCGG CCAGGAGGTC
GGCATCTTCC AGGTCACCGG TCCGGCCCGG GGCGTGTTCG CCCTCGTCTT CGCCTTTCTC
GCCCTGGCTT TCGCACCGGC CGGGGCGGTG CACAACTCCG TGCTGCCGGT GACCCTGCTG
TGCGTGGCCG CCGGCCTGGG CTGCCAATCG ATGGGCGCCT TCGCCGATTC GGCCCTGATG
GGCACCACCG GAGCGATCAT CCTGCTGGTG GCCTCCGCGC TGGCCGCCTA CATGCTGGTG
GAGAAGTTCT ACTGGCTGAC CCTGGGCCGG CGGGTGGTCC CGCTCGGGCC GCCGTGGATC
GCCGGGAGCG ACGACCGCGA GCCGTAA
 
Protein sequence
MAVDVAPRPT TRAAAGISAA DPGLIGLLGF VLATLTAQLE HLGVQNEGPV FWVGAVFGGV 
VQVTAGMLSY FKGDNFHFVV YNAFGWYWIV VPGFLLGQEV GIFQVTGPAR GVFALVFAFL
ALAFAPAGAV HNSVLPVTLL CVAAGLGCQS MGAFADSALM GTTGAIILLV ASALAAYMLV
EKFYWLTLGR RVVPLGPPWI AGSDDREP