Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3729 |
Symbol | |
ID | 8449348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4089397 |
End bp | 4091085 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645042784 |
Product | L-lactate transport |
Protein accession | YP_003203020 |
Protein GI | 258653864 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0206932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.436025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC CGTACCAGCC CGACGTTCAA GCGGTCGGCG ACAGCGTTTT CCTGACGGCG ATGGTGTCGA TCATCCCACT GCTCGTGGTG TTCGTCTTCC TCGGGGTTCT GAAGACGAAG GCGCACATCG CTGGTCTGGC GGGTCTGGCC GCCGCGATCC TGGTGGCGAT CCTGGCGTTC GGGATGCCGG TGGATCTGTC CTTGCTGGCC GCGTCCCAGG GCTTCGTGTA CGGCCTGTTC CCGATCATGT GGATCGTCAT CGCGGCGATC TGGTTGTACG AGTTGACGGT GATCAGCGGG CGGTTCGAGG ATCTGCGGAC CGCGTTCAAC CGGGTCTCCG ACGACCCGCG GATCCAGGGC ATCATCATCG CGTTCTGCTT CGGCGGTCTG CTCGAGGCTC TGGCCGGGTT CGGCGCCCCG GTGGCGATCA CCGGTGTCAT GCTGGTCTCG TTGGGCTTTT CCGCGATGCG GGCCGCGGCG ACCGTGCTGT TGGCCAACAC CGCGCCGGTC GCGTTCGGCG CGATCGCCAT CCCGATCATC ACGGCCGGCA ACCTGACCGG CATCGACTAC CACGAGATCG GCGCCGTGGT CGGCCGGCAG TCCCCGATCC TGGCGGCATT CGTCCCGCTG CTGCTGGTGT TGATCGTGGA CGGCCGGCGC GGGCTGCGAC AGACCTGGCC GGCTGCCGTC GTGGCCGGCC TGTCATTCGC CGTCGCCCAG TTCCTGAGCT CGAACTACAT CTCGGTCGAA CTCACCGACA TCATCGCCTC CCTGGTCGCG CTGCTGGCCG TAGTCCTCCT GCTGCGGTTC TGGACGCCCA AGGGTGGGGA CGAGGCCCGC CAGCGGCTGG CCATGGCCGC GAAGGACGAG CACATCGAGC CGGTCACCGG CACCGGTGGG TCCGCGCCAG TGGCGACCGA GGTCTCGACC GAGAAGTTGA CCGTCGGCCG CACCGTGATG GCGTTCCTGC CCTACCTGGT GGTCATCGTG GTGTTCACTC TGGCCAAGTT GTGGGCGCCG CTGAAGACCT GGCTCGCCGG TACCGACGTC AAGATCCCCT GGCCGGGGTC GGACGGCTTC ATCCTGAATG TCAGCGGCAC CACCTCGACC GCCACCCAGT ACACCCTGAG CTGGCTGTCC GGGGCGGGCA CCCTGTTGCT GATCTCCGGC ATCATCGTGG TGGCCGCCTA TCGGATCTCC CCCGTCGTCG CGGTCAAGGA GTTCGGCCGC ACCATCTACA AGTTGCGGTA CGCGCTGCTG ACCGTGGGCA GCGTGCTGGG TTTGGCCTAC GTGATGAACC TGTCCGGTCA GACGATCACC ATCGGTCAGT GGCTGGCCGC CGGTACCGGC GCGTTCTTCG CGTTCCTGTC CCCGATCCTG GGGTGGGTGG GTACCGCTGT CACCGGCTCG GACACCAGCG CCAACGCCCT GTTCGCCACC CTGCAGCAGT CCGCGGCCGA GGAGGCGGGC CTGGATCCGA CGCTGCTGGT CGCCGCGAAC ACGTCCGGCG GTGTGGTTGG CAAGATGATC AGTCCGCAGA ACCTGACCAT CGCTGCGACC GCGGTCGGTC TGCTCGGCCG GGAGTCCGAC ATCCTGCGCC GGGTCCTGAA GTGGAGCATT GGCCTGCTGC TGGTGATGTG CGTCCTGGTC TACCTGCAGA GCAACGTCCT CGCCTGGATG ATCCCCTGA
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Protein sequence | MATPYQPDVQ AVGDSVFLTA MVSIIPLLVV FVFLGVLKTK AHIAGLAGLA AAILVAILAF GMPVDLSLLA ASQGFVYGLF PIMWIVIAAI WLYELTVISG RFEDLRTAFN RVSDDPRIQG IIIAFCFGGL LEALAGFGAP VAITGVMLVS LGFSAMRAAA TVLLANTAPV AFGAIAIPII TAGNLTGIDY HEIGAVVGRQ SPILAAFVPL LLVLIVDGRR GLRQTWPAAV VAGLSFAVAQ FLSSNYISVE LTDIIASLVA LLAVVLLLRF WTPKGGDEAR QRLAMAAKDE HIEPVTGTGG SAPVATEVST EKLTVGRTVM AFLPYLVVIV VFTLAKLWAP LKTWLAGTDV KIPWPGSDGF ILNVSGTTST ATQYTLSWLS GAGTLLLISG IIVVAAYRIS PVVAVKEFGR TIYKLRYALL TVGSVLGLAY VMNLSGQTIT IGQWLAAGTG AFFAFLSPIL GWVGTAVTGS DTSANALFAT LQQSAAEEAG LDPTLLVAAN TSGGVVGKMI SPQNLTIAAT AVGLLGRESD ILRRVLKWSI GLLLVMCVLV YLQSNVLAWM IP
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