| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3686 |
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| Symbol | |
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| ID | 8449305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4043694 |
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| End bp | 4045493 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645042750 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003202986 |
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| Protein GI | 258653830 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0906801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0462514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAT TGGTGGCGGA TGTGGTGTTG TCCCGGTTGC GAGAATGGGG GGTGCGGCAG
GTCTTCGGGT ACCCGGGGGA CGGGATCAAC GGCCTGTTGG CGGCGTGGGG GAGGGCGAAG
GACGACCCGC AGTTCGTGCA GGCCCGGCAC GAGGAGATGG CCGCGTTCGC CGCCGTCGGC
TTCGCCAAGT TCAGCGGTCG GGTCGGGGTG TGCGTGGCGA CCAGCGGACC CGGCGCGATC
CACCTGCTGA ACGGGCTGTA CGACGCGAAA CTCGATCACG TCCCGGTCGT CGCGATCGTC
GGGCAGACGG CCCGCTCGGC CATGGGCGGC TCGTACCAGC AGGAGGTCGA CCTGCTCTCG
CTGTTCAAGG ACGTCTGCAG CGACTACGTG CAGATGTGTA CCGTCCCACA GCAGCTGCCG
AACCTGATCG ACCGGGCGAT CCGGATCGCT CAGACCGAGC ACGCCCCGAC CTGCGTGATC
GTGCCGTCCG ACGTGTTCGA CCTGGACTAC GAACCGCCGG GGCACGAGTT CAAGCAGGTC
CCGTCCAGCG TCGGCACCGC CTGGGCGACC GCCGCCCCGG ACCCGGACGC GGTCCGCGCC
GCGGCGGACC TGCTCAACGC CGGGGAGAAG GTCGCGTTGC TGGTCGGTCA GGGGGCCAGA
GGCTGCGAAG CCGAGCTGAC CGAAGTCGCG GACCTGCTGG GCGCCGGCGC CGCGAAGGCG
TTGCTGGGCA AGGACGTGCT GCCCGACACC CTGCCCTGGG TCACCGGTTC GATTGGCCTG
CTGGGCACCA CCGCCAGCTA CCGGCTGATG ATGGGCTGCG ACACGCTCCT GACCATCGGG
TCGAACTTCC CGTACACCCA GTTCATGCCG GACCTCGGGC AGGCCCGGGC CGTGCAGATC
GACCGGTCCG GCAAGTGGAT CGGCATGCGG TACCCCTACG AGATCAACCT CGTCGGGGAC
GCGAAGGCCA CTCTCAAGGC GCTGATCCCG CTGTTGAACC GGAAGGCCGA CCGGAGCTGG
CGGGACCGGG TGCAGGCCGA TGTCGCGGAC TGGTGGCAGA CCGCCGAGCG CCGCGCGTTG
ACCGCCGCCG ATCCGGTCAA CCCGATGCGG ATCTTCCATG AACTGTCGCA GCGGTTGCCC
GTCGACGCCA TCGTGGTCAG CGATTCGGGC AGCGCAGCGA ACTGGTACGC CCGGCACCTG
CGCTTTCACG GCGACATCCG CGGGTCACTG TCCGGGACGC TGGCCACGAT GGGTCCGGGG
GTGCCGTACG CGATCGGCGC GAAATGGGCG CACCCGGACC GACCGGTGAT CGCCCTGGTG
GGAGACGGAG CGATGCAGAT GAACGGACTG GCCGAGCTCA TCACCATCTC GCACTACTGG
TCGCAATGGG CCGACCCGCG GCTCATCGTC GCGGTGCTGC ACAACAACGA CCTCAACCAG
GTCACCTGGG AGATGCGGGC CATGTCGGGT GCCCCCAAGT TCGCCGAATC GCAGACTCTC
CCGGACGTCG ACTACGCCGG ATTCGCGACC GGTTTGGGTC TGTCCGGCGT CCGGATCGAC
GACCCCGATG CGCTGGGCCC GGCCTGGGCG ACCGCGTTGG CGGCGACCCG GCCCACCGTG
CTGGACGTGA TCTGCGACCC GGATGTGCCG CCGATCCCGC CGCACGCCAC CTTCGATCAG
GTCAAGTCCG TCGCCGGGGC GGTGCTGCAC GGTGACGAGG ACGCCTGGGG TTTCGTCAAA
CAGGGTGTGA AACAGAAGGT GCAGCAGTAT CTGCCCGGAA CCAAGGGGGG AACGTCATGA
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| Protein sequence | MAELVADVVL SRLREWGVRQ VFGYPGDGIN GLLAAWGRAK DDPQFVQARH EEMAAFAAVG
FAKFSGRVGV CVATSGPGAI HLLNGLYDAK LDHVPVVAIV GQTARSAMGG SYQQEVDLLS
LFKDVCSDYV QMCTVPQQLP NLIDRAIRIA QTEHAPTCVI VPSDVFDLDY EPPGHEFKQV
PSSVGTAWAT AAPDPDAVRA AADLLNAGEK VALLVGQGAR GCEAELTEVA DLLGAGAAKA
LLGKDVLPDT LPWVTGSIGL LGTTASYRLM MGCDTLLTIG SNFPYTQFMP DLGQARAVQI
DRSGKWIGMR YPYEINLVGD AKATLKALIP LLNRKADRSW RDRVQADVAD WWQTAERRAL
TAADPVNPMR IFHELSQRLP VDAIVVSDSG SAANWYARHL RFHGDIRGSL SGTLATMGPG
VPYAIGAKWA HPDRPVIALV GDGAMQMNGL AELITISHYW SQWADPRLIV AVLHNNDLNQ
VTWEMRAMSG APKFAESQTL PDVDYAGFAT GLGLSGVRID DPDALGPAWA TALAATRPTV
LDVICDPDVP PIPPHATFDQ VKSVAGAVLH GDEDAWGFVK QGVKQKVQQY LPGTKGGTS
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