| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3645 |
|---|
| Symbol | |
|---|
| ID | 8449264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3999176 |
|---|
| End bp | 3999877 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645042710 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_003202946 |
|---|
| Protein GI | 258653790 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2345] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0000603438 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0337918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC AAGATTTTGC TGATCGAGTG ACCGGTCTGG CGGCCCTGGC CGACCCGGTC
CGCCGTGAGC TGTACCTGTT CGTGGCCGCC CAATCCGAAC CGGTCAGCCG AGACCGGGCC
GCCGAAGGCG TCGCCGTCCC ACGGCACACG GCGAAATTTC ACCTGGACAA ACTGGTCGAG
CAGGGTCTGC TGGACACCGA GTTCCAACGA CTGTCCGGCC GGCGGGGCCC CGGCGCCGGA
CGACCCACCA AGCTGTACCG GCGGTCCGGC CGGGAACTGT CGGTGACCCT GCCCGAACGC
CGGTACGACC TCGCCGGGCA GCTGTTCGCC CAGGCCATCG ACGACTCCAC CCGGGCCGGC
GCACCGGTGC TGGACGCGGT GCACACCGCC GCCGCCGAGT ACGGCCGGAC CCTCGGGACC
CAGGCGCGGC AGGCTCTGGG CCCACGACCC GGGCCAGCAC AACGGGCCGC CGCGGTGTGC
GCCGTCCTGG CCGCGCACGG ATACGAACCC CGACGTGTGG ACTCGAGTGT CATCCTGGTC
AACTGTCCGT TCGACGCGTT GGCTCGAGAC CACACCGACC TGGTCTGCGG GATGAACCTC
GCCCTGCTCG GCGCGGTCGC CGACCGGGTC GGTGACGGGA CACTGACGGC CCGGCTGGAC
CCGGCAGACG ACCGCTGCTG CGTCGTGCTG AACACCCCGT GA
|
|---|
| Protein sequence | MAAQDFADRV TGLAALADPV RRELYLFVAA QSEPVSRDRA AEGVAVPRHT AKFHLDKLVE
QGLLDTEFQR LSGRRGPGAG RPTKLYRRSG RELSVTLPER RYDLAGQLFA QAIDDSTRAG
APVLDAVHTA AAEYGRTLGT QARQALGPRP GPAQRAAAVC AVLAAHGYEP RRVDSSVILV
NCPFDALARD HTDLVCGMNL ALLGAVADRV GDGTLTARLD PADDRCCVVL NTP
|
|---|
| |