Gene Namu_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3542 
Symbol 
ID8449161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3890561 
End bp3891562 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content73% 
IMG OID645042620 
ProductAFG1-family ATPase 
Protein accessionYP_003202856 
Protein GI258653700 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000203163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00860577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGCCC TGCACCTGGT CGACCGCGAT CCCGTCGTGG ACGCGGACGA ATTGATCGAG 
GGGCTGGTGC CGCCGCCGCG GTTCAACGAC GTGCGCTTCT CCACCTACCG GCCGGCGCCC
GACCAGCCCA GCCAGCAGGC GGCGGTGACG GCGTTGTCCG CGTTCGCCGA GACGATCGCG
CGGCCGCCCA AGAAGGGCCT GTTCCGCCGG TCCGGCTCGA CCCCGGCCGG CGGCTACTAC
CTCGACGGCG GGTTCGGGGT CGGCAAGACC CACCTGCTGG CCTCGCTGTG GCACGCCGTC
CCCGGGCCGA AGGCGTACGG CACGTTCGTC GAGTACACGC ACCTGGTCGG CGCGCTCGGA
TTCGCCGAGA CGGTGAGCCG GCTCTCCGGC CACAAGCTGG TCGCCGTCGA CGAGTTCGAG
CTGGACGACC CGGGCGACAC CATGCTGATG ACCCGGCTGT TGGGCCAGCT CTGCGACGCC
GGAGTGCACC TGACCGCGAC GTCGAACACC TTGCCGGACA AGCTCGGCGA GGGCCGGTTC
GCCGCGGAGG ACTTCCGCCG CGAGATCCAC GCGCTGGCCT CGCGGTTCCA GACGCTGCGG
GTCGACGGGC CGGACTACCG GCACCAGGGG CTGGCCCCGG CCCCGCCGCC GCTGGGCGAC
GCCGAGCTGG TCGCCGCGGC CCAGGCGCCG GGCGCGAGCC TGGACTCCTA CGCGGACCTG
ACCGCCAAGC TGGAGACCCT GCACCCCTCC CGGTACGGCC AGCTGGTGGA CGGGGTCAGC
TCGGTGCAGT TGCGCGACGT GCAGCCGCTG GACAACCAGT CCGCCGCGCT GCGCTGGGTG
GTGCTGATCG ACCGGCTCTA CGACCGCTCC ATCCCGGTGC GCGCCTCCGG GGTGCCGCTG
GACGAGATCT TCACCCCGGA GATGCTGGCC GGCGGGTACC GCAAGAAGTA CAAGCGGGCC
ACCTCCCGCA TCCTCGCGCT GGCCCGCGAC GCCGTCTCCT AG
 
Protein sequence
MPALHLVDRD PVVDADELIE GLVPPPRFND VRFSTYRPAP DQPSQQAAVT ALSAFAETIA 
RPPKKGLFRR SGSTPAGGYY LDGGFGVGKT HLLASLWHAV PGPKAYGTFV EYTHLVGALG
FAETVSRLSG HKLVAVDEFE LDDPGDTMLM TRLLGQLCDA GVHLTATSNT LPDKLGEGRF
AAEDFRREIH ALASRFQTLR VDGPDYRHQG LAPAPPPLGD AELVAAAQAP GASLDSYADL
TAKLETLHPS RYGQLVDGVS SVQLRDVQPL DNQSAALRWV VLIDRLYDRS IPVRASGVPL
DEIFTPEMLA GGYRKKYKRA TSRILALARD AVS