Gene Namu_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3538 
Symbol 
ID8449157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3886274 
End bp3886891 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content77% 
IMG OID645042616 
Productprotein of unknown function DUF121 
Protein accessionYP_003202852 
Protein GI258653696 
COG category[S] Function unknown 
COG ID[COG1920] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000427538 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00109998 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGATCGTGC CGGTCAAGTC GACGGCCCGG GCCAAGAGCC GGCTGCGGCT GGACCCGGCC 
GATCGGCGTC GCCTGGCCGT GGCCATGGCC CGGGACACGG TGTCCGCGGT GTCCGGGGCG
GCCGTGGTGG GCCGGACCGT GCTGGTCGTG GAGGAGGCCG CGGACGGGGT GAGCCTGGCC
ACGGGTCCCG GGATCGAGGT GTTCCTCACC CGCACCGCCG AACTCAACGA CGCCATCCGG
GACGGGCTGA CCGCGCCCGG CCTGGGCCCG GACGACCCGG TCGCCGTGCT GCCGGCCGAC
CTGCCGTCGC TCACGCCGGA CGAGCTGGCG CAGGCGTTGG GACGGGCGGC CGGCCACCGG
TCCTGCGTCG TGCCCGACCG GGCCGGCACC GGAACCACCC TGCTCACCGC GCAGACACCC
GCCCTGCTGC ACCCGCGGTA CGGTCTCGGC TCGTTCCGGG CGCACGTGGA GCACGGGGCG
TGGCCGCTGC GCCTGCCCGG CCGCAGCGGG CTGCGCCGCG ACGTCGACCG GGTGGACGAC
CTGGCCTCGG TCACCGGTCC GCACACCCTG GCCGTGCTCG GCCGGTTGGG CGTGGACCGG
CCGGGACTGG CCGGCTGA
 
Protein sequence
MIVPVKSTAR AKSRLRLDPA DRRRLAVAMA RDTVSAVSGA AVVGRTVLVV EEAADGVSLA 
TGPGIEVFLT RTAELNDAIR DGLTAPGLGP DDPVAVLPAD LPSLTPDELA QALGRAAGHR
SCVVPDRAGT GTTLLTAQTP ALLHPRYGLG SFRAHVEHGA WPLRLPGRSG LRRDVDRVDD
LASVTGPHTL AVLGRLGVDR PGLAG