Gene Namu_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3530 
Symbol 
ID8449149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3879716 
End bp3880873 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content73% 
IMG OID645042608 
Productglycosyl transferase group 1 
Protein accessionYP_003202844 
Protein GI258653688 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000188303 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00829445 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAGC AACGACCACG GGTGGTGGTG GTGGCCGAGG CCGCACCGAT GCGCGGGGGG 
ATCGCCACCT TCGCCGAGAC CATCACCGCC GATCCCCTGC TGGCCCGCGA CTACGACGTC
GAGTTGCTCA ACACGGCCCG GGTGGCCACT CGGGAGGGCG GCCGGTTCAA CCTGGACAAC
GTCCGCTACG CGCTGGCCGA TGCCTGGCGG GTGTTCAAGG CCGCCCGCCA GGCCGACATC
GTGCACCTGC AACTGGTGGC CGACCCGGGC CTGCCCGCGC TGCGCGCCGC CGCGCTGAAC
CTGGCCGCCT CGGCCGGCCG GGCCAAGCTC ATCGCGCACG TGCATTCCGC CGTGGGCAAT
GCCGGGCGCC CCGAGATCGC CGGCTACGGA CGGGTCGACC GGATGGCCCT GCGCACGCTG
CGGCGAGCCC GCCTGGTGTG CACCGTGTCC ACCGTCGGCA CCGCCACCAT GCAGGCCCTG
GCCCCTCGCA CCTGGGTCGA GACCGTCGAC AACGCGGTCA ATCTCGACGA CTTCCCGGCC
GGCACGGCCG ACACCGAGCC GCCCACCGTG CTGTTCGTCG GCGTCATCTG CCAGCGCAAG
GGCCTGTTCG AACTGGCCCG GGCGGCCCGG CTGCTGCACG AGCGCGGCAT CCACGACTGG
AACCTGGTGG TGGTCGGCGG CCAGGGCCCG ACCCCGCAGG CCGAGTACGA CCAGATCGTG
GCCGAGTTCG ACGCCGCCGG ATTGCGCGCG GCGATGGTCG GCCCGGAATA CGGCGACCAG
ATCAAGGCCC GGCTGGCCTC GGCCGACATC TTCGTGCTCC CCTCGTTTCT GGAGGGTCAA
CCGATCGCGA TCATCGAGGC CATGGCCTCC GGGCTGGCCG TCGTGGGCAC CTCCATCGGC
GCGGTGCCCG ACCTGATCCG CGACGGCGTC GAGGGCCGGG TGGTCGAGCC CGGGGACGCG
CCGGCCCTGG CCGACGCGCT GGCCCAGGTC ATCGGCGATC AGGACGCCCG CCGGCAGATG
GGCCACGCGG CCCGTGAGCG GGCCGAACGC TCGCACGGGC TCGAGCAACT GTCCGCGCGG
CTGAACTCCC TGTACCGGGC GGTGCTCTCG GGCCGGCGCA GCGCTGCGGT CGAGCGGTCG
GTGACCGTCC CGCAATGA
 
Protein sequence
MSEQRPRVVV VAEAAPMRGG IATFAETITA DPLLARDYDV ELLNTARVAT REGGRFNLDN 
VRYALADAWR VFKAARQADI VHLQLVADPG LPALRAAALN LAASAGRAKL IAHVHSAVGN
AGRPEIAGYG RVDRMALRTL RRARLVCTVS TVGTATMQAL APRTWVETVD NAVNLDDFPA
GTADTEPPTV LFVGVICQRK GLFELARAAR LLHERGIHDW NLVVVGGQGP TPQAEYDQIV
AEFDAAGLRA AMVGPEYGDQ IKARLASADI FVLPSFLEGQ PIAIIEAMAS GLAVVGTSIG
AVPDLIRDGV EGRVVEPGDA PALADALAQV IGDQDARRQM GHAARERAER SHGLEQLSAR
LNSLYRAVLS GRRSAAVERS VTVPQ