Gene Namu_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3505 
Symbol 
ID8449124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3849011 
End bp3849670 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID645042583 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003202819 
Protein GI258653663 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000551807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.288911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGG TCAGAGTCCA CAACTTCTCG GTGTCGCTGG ACGGTTTCGG CACCGGCGAA 
GGTCAGCAAC TCGACGCTCC GTTCGGGCAT GCGGGCAGCC GGTTGATGGA GTGGGCGTTC
GAGACGCGCA CGTTCCGCGA GATGGGGCTG CACGGAACGA CGGCGGGATC TCGCGGCGTC
GACGAGGCGT TTGCCAGCCA ATGGGCTCCG GGCATCGGTG TGGAGATCAT GGGGCGCAAC
AAGTTCGGCC CGATCCGCGG GCCCTGGGCG GACGAGGAGT GGAAGGGCTG GTGGGGTGAC
GACCCGGTCT TTCACACCCC GGTCATCGTG CTGACCCACC ATCCGCGGCC GCCGCTGGAG
ATGGCCGGCG GGACCACGTT CCATTTCGTC GACGCCGACC CGGTCGCCGC GCTGGCGCAG
GCCCGGGCCC TGGCCGGCGG CCTGGACGTC CGGATCGGCG GCGGGGTCAG CACGGTGCGC
CAGTTCCTCG AGGCCGACCT GATCGACCAC CTGCACATCG TCGTCGTGCC GATCATTCTG
GGCCGGGGCG AGCGGCTCTG GGACGGCCTT GAGGGCCTCG AGGAGCGTTT CGCCATCGAG
GTGACTCCGT CGCCGTCCGG CGTCATCCAT CTGATCTTGA CCCGACGCGC CTCCGAGTAG
 
Protein sequence
MSLVRVHNFS VSLDGFGTGE GQQLDAPFGH AGSRLMEWAF ETRTFREMGL HGTTAGSRGV 
DEAFASQWAP GIGVEIMGRN KFGPIRGPWA DEEWKGWWGD DPVFHTPVIV LTHHPRPPLE
MAGGTTFHFV DADPVAALAQ ARALAGGLDV RIGGGVSTVR QFLEADLIDH LHIVVVPIIL
GRGERLWDGL EGLEERFAIE VTPSPSGVIH LILTRRASE