Gene Namu_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3494 
Symbol 
ID8449113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3838250 
End bp3839464 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID645042572 
Producthypothetical protein 
Protein accessionYP_003202808 
Protein GI258653652 
COG category[L] Replication, recombination and repair 
COG ID[COG3598] RecA-family ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000189556 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0221167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA ACTATTGGAA CGCGGCCGAA TTGCTCGCGA CCGTTCTGCC GATCCCGAAG 
TGGGCGGTCT CCGGGGTCAT TGCCGAGGGC GTCACCCTGC TCGCCGGCCC GCCCAAGGTC
GGCAAGTCGT GGTTGGCCCT GAACCTCGCG GTGGATGTCG CGTCGGACCT CGGAGTCGCC
CTCGGCGGCA TCGACGTCCA GCAGGGGGAT GTTCTGTACC TGGCGTTGGA GGACACGGCC
CGTCGCCTCC AGGGCCGGTT GCGGAAGGTG CTGGGTGAGC ATCCGGCGCC CGAGAACCTG
CACATCGCAA CCGAATGGCC GGGCCTCCAG GACGGAGGTG CGGATCAGCT CGATCGGTGG
CTCCGCGATC ATCCAGCAGC TCGCCTGGTC GTGGTTGACG TGCTCGCGAA GATCCGTGGA
ATCAGCTCCG CGAACGGCAA CCAGTACGCC GAGGACTACG CGGTCATGAA CCAGTTGAAG
ATGGTCGCGG ACAAGCACGG CGTAGCAGTC CTGGTGGTCA CGCACGTCCG GAAGATGGCC
TCCGCCGACT TCCTTGAGCA GGTCTCCGGA ACCAACGGCA TCGCGGGTGC GGCCGACTGC
ACCATCGTCC TGAGCCGAAC CCGCGGTGAG GTTCACGGCG AGCTGGACAT CACCGGCCGC
GATGTAGAAG AGACCAAGTA CGCCATGATC TGGCGTCCTG ATGCCGGGCG GTGGGATCTC
GACGGCAATG GTCTGGCTGA AGCGCAGGCC GCCGCCAGAC GAGCCGAGAT CACGATCGGC
CTCGGAGATC GCTCCACGGA GATCATCGAC TTCATCGCCC AGCACCCGGA TGGCGTCCGG
GCTGCTGCGG TGGCCGACCA CCTGGCGATC GACCAGGACA AGGTCCGGCC CTACCTCCAG
CGGCTGGAGA AGTCCGGTCG CATCTTGAAG CCGAGCACGG GCCTCTACAC CCCAGTTACG
GGTGTTACGA CTGTTACGGC GGGGGACAAC GACGCAGGTC AGGGCCCTAG GCTAGGCGTA
ACACCCGCTG ACGTAGGTGT TACGCCCACT GTTACGGCGC CGCCGCCGGT ATCCGCAGGT
CACAGCCTCG GCGTAACACC CGTAACACCC GTAACCGGGG TACTGAAGGC CTGCGGTCAC
GGCCCGCTCT CCGCCAACGG CAAGTGCGGC ATCTGCATCG CAGACCGGAT CTCGGCACAG
CGGACCGCGT CATGA
 
Protein sequence
MTKNYWNAAE LLATVLPIPK WAVSGVIAEG VTLLAGPPKV GKSWLALNLA VDVASDLGVA 
LGGIDVQQGD VLYLALEDTA RRLQGRLRKV LGEHPAPENL HIATEWPGLQ DGGADQLDRW
LRDHPAARLV VVDVLAKIRG ISSANGNQYA EDYAVMNQLK MVADKHGVAV LVVTHVRKMA
SADFLEQVSG TNGIAGAADC TIVLSRTRGE VHGELDITGR DVEETKYAMI WRPDAGRWDL
DGNGLAEAQA AARRAEITIG LGDRSTEIID FIAQHPDGVR AAAVADHLAI DQDKVRPYLQ
RLEKSGRILK PSTGLYTPVT GVTTVTAGDN DAGQGPRLGV TPADVGVTPT VTAPPPVSAG
HSLGVTPVTP VTGVLKACGH GPLSANGKCG ICIADRISAQ RTAS