Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3449 |
Symbol | |
ID | 8449064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3792093 |
End bp | 3793289 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 645042525 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_003202765 |
Protein GI | 258653609 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00146797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00488503 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGACGA CGTCGCCCGA CCCCAGGCGG GCCATCGCCG CGGCCGCGGT GCGCGATGCC GGGGTGGCCG ACGAGGAGCT GCTCGGGGAC TTCATCGCCA CCCTGGCGGC CACCGTGGCC GCCGGTGAAC GGCTGCCCCG GGCGGCCCGG CGCCGGTGCG CGGACAGCGG CCGGCGGGCC GCGGTCTCCG GGGTGCCGCT GCGGGCGCTG CTGGATCTGC ACCTGTCGGT CGCCTGGCGG CTCTGGCGGC ACGTCGCCCC GGCCGACGAT CCGCAGGACC CCGTGCAGTC GGTCGTCCGG GCCGGCGAGG TGATGCTGCG GGCCATCGAC GACGCGGTCG CCGCGCTGAC CGAGGGCTAC CAGCTGGCCC GGCGTCAGGT GGTGGCCGAG CAGGCCGCGG CCCGCCGGGA GTTCGTCGAC GACCTGCTGC TCGGCGGCGC CCAGGCCGCC GTCGGGCTGG CCGAACGGGC CGGCGAGTTC GGGCTGAATC TGGCCGGTCC GCACGCGGTC GTCGTCGTCC GGGCGCAGCG GCCGTTCGTC GAGTCCTCGC CGCTGACCTC GATGCTGGAG CGATCCCTGA TGGGCGCCAA AGCCGACGCC GACGCGCTGG TCACCACCAA GGACGATGCC CTGGTCGTGG TGTTCGCCGC GCCCGACCGG GCCGCGGTCG ACCAGGTGGT GAGCGCCCTG ACCGCCAACC TGCCGGCGCC CGAGGCCGAG GCCGGTGTCC GGCTGCACCG GGTGGCCGCC GTCGGCGCCT GGCGAATGGG CGTCGGCCGC GCCCACCCGG GGCCGGCCGG GGTCGGCCAG TCCTACGCCG AGGCGATCGA CGCGCTGGCC CTGGGTCAGC GGCTGGGCCT GCCGGAACCG GTGGTCGACG CCGCCGACCT GTTGCTGTAC CGGGTGCTGG TGCGTGACGA GGCGGCCATG CGGGAACTCG TCGACGCCGT GCTGGCCCCG CTGGTCGGGG CCCGCGGCGG GGCCGAGCCG CTGCTGCAGA CTCTGGACGC CTACTTCGGC GCCGGCGGCA ACGCGACCCT GGCCGCGCGC TCGTTGCACC TGTCGGTGCG GGCCCTGACC TACCGGCTGG CCAAGATCGC CGATCTGACC GGGCGCGACC CGGTCGACCC CCGGCACCGG CTGGAGCTGC AGACCGCCCT GGTCGGGGCG CGTCTGCTCG GGATGACCGG AACATGA
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Protein sequence | MPTTSPDPRR AIAAAAVRDA GVADEELLGD FIATLAATVA AGERLPRAAR RRCADSGRRA AVSGVPLRAL LDLHLSVAWR LWRHVAPADD PQDPVQSVVR AGEVMLRAID DAVAALTEGY QLARRQVVAE QAAARREFVD DLLLGGAQAA VGLAERAGEF GLNLAGPHAV VVVRAQRPFV ESSPLTSMLE RSLMGAKADA DALVTTKDDA LVVVFAAPDR AAVDQVVSAL TANLPAPEAE AGVRLHRVAA VGAWRMGVGR AHPGPAGVGQ SYAEAIDALA LGQRLGLPEP VVDAADLLLY RVLVRDEAAM RELVDAVLAP LVGARGGAEP LLQTLDAYFG AGGNATLAAR SLHLSVRALT YRLAKIADLT GRDPVDPRHR LELQTALVGA RLLGMTGT
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