Gene Namu_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3417 
Symbol 
ID8449032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3756126 
End bp3757151 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content75% 
IMG OID645042494 
ProductNUDIX hydrolase 
Protein accessionYP_003202734 
Protein GI258653578 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000000769594 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000248921 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGACCA CGATCGTGGT GTTGCTGGTG GTGCTGCTGC TCATCGCCGC GCTGCGCCTG 
TGGCTCACCG CGAACCGGCT GGACCGCCTG CACGTGCGCA CCGAGGCCGC CTGGTCGGCC
CTGGAGGGGG CGCTGTCCCG GCGGGTGGTG GCCGCCCGCG CGGTCGCCGC GACCGGGGGA
CTGCCGCCCG CACAGGCCGA CGAGCTGCGC CGGGTCGCCG ACGCCGCCGA CCGCGCCGAT
CGCGCGCACC GGGCGGACGC GGAGAACGAT CTGGCCCGGG TGCTCAGCCT GCTCCCGCCG
CCGAACGAGG AACATCTGGC CGCCGAGCTG GCCGACGCCA ACGAGCGGGT GCTGCTGGCC
CGCCGTTTCT ACAACGACGC GGTCCGCGAC ACCCGGGCGC TGCGCTCGGT CTGGTTCACC
CGGATCTTCG GGCTGGCCGG CCGGGCCGCG CTGCCCGACT ACTTCGAGAT CACCGAGTCC
AGCGCCAAGG CCGAACCCGG CGCGGTCGCC GCCCCGGTGC GGCGCACGGC CGCGCGGGTG
CTGCTGGTCG ACGACCGGGC GCGGGTGCTG CTGCTCTCGG GCACCGACCC CAAGGTCGGC
TCCCGCTGGT GGATCACCCC CGGCGGCGGC GTCGAGGGTC AGGAACCGTT GGTGCAGACG
GCGGTCCGTG AACTGGCCGA GGAGACCGGC CTGCAGCTGC AGCCGGCCGA GCTGATCGGA
CCGGTGTGGC GGCGGGTCGC CCGGTTCCAC TTCACCGGCG TGGACTACGA GCAGACCGAG
TTCTACTTCG CGGCGTCCTT TGTCACCGCC GCGCCGGGTG GGGCCGACCG ATCCCCGCCC
GCGTTCGACG CGTCCGGCCA CACCAACGAC GAGCGGCTCA CCCTGACCGG CCAGCGCTGG
TGGACCGGCG AGGAGCTGCG CAGCACCGGC GAGGACGTCT ACCCCCGCCA GCTGGCCACC
CGCCTGCCCG ACGTCGTCGC GGCGCTGCAG GGCTGCGACG ACGTCGGGAC CGTCGACGTC
GACTGA
 
Protein sequence
MTTTIVVLLV VLLLIAALRL WLTANRLDRL HVRTEAAWSA LEGALSRRVV AARAVAATGG 
LPPAQADELR RVADAADRAD RAHRADAEND LARVLSLLPP PNEEHLAAEL ADANERVLLA
RRFYNDAVRD TRALRSVWFT RIFGLAGRAA LPDYFEITES SAKAEPGAVA APVRRTAARV
LLVDDRARVL LLSGTDPKVG SRWWITPGGG VEGQEPLVQT AVRELAEETG LQLQPAELIG
PVWRRVARFH FTGVDYEQTE FYFAASFVTA APGGADRSPP AFDASGHTND ERLTLTGQRW
WTGEELRSTG EDVYPRQLAT RLPDVVAALQ GCDDVGTVDV D