Gene Namu_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3397 
Symbol 
ID8449012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3734896 
End bp3736083 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content71% 
IMG OID645042474 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_003202714 
Protein GI258653558 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00458345 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000182416 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTCAAGG CGACCGCCGC GGTGGTCGCG GCGAACGCGG AGGCCATCAC CGCGGTGTTC 
TACCCGAACA TGTTCGCCGC GCACCCGGAG CTGCTGCGGG TGTTCAACAA GGGCAACCAG
GCCTCGGGGG AGCAGAGCCA GGCGCTGGCC GCCTCGGTCG TCGCCTTCGC GGTCAGCCTG
ATCGACCCGG ATGCGCCCTC CTTCGACCAC GTCAAGACCC GCATCGCCTA CAAGCACGTG
TCGTTGGGCA TCACCCCGGA GCAGTATCTG ATCGTCGGCA AGTTCCTGAT CGGGGCGGTC
GCCGAGGTGC TCGGTGACGC GGTGACGCCG GAGATCGCGG CCGCCTGGAC CGAGGTCTAC
TGGCTCTTCG CGGTCATCCT GATCGCCGAG GAGGCCAAGC TCTACCAGCA GGCCGGGGTC
GACCCGACGC GCCCGCTGCG GCCGTACCGG ATCGCCCGGC GGATCGAGGA GACCCAGGAC
GTGGTGTCCC TGGTCCTGGA ACCGGCCGAC GGCGGGCCGC TGCCGACGAT GCAGCCGGGC
CAGTACGTGT CGGTGTTCGT CGACCTGCCC GACGGCTCCC GGCAGCCGCG CCAGTACACC
GTGTCCTCCA CCGCCTTCGG CACCCGCCTG CAGATCACGG TCAGCCGGGT CAAGGGGGTC
GACGGCGCGC CCGACGGCCA GGTCTCGGCC TACCTCAACG ACCAGGCCAA GGTCGGCGAC
GTGCTGGACA TCAGCGCCCC GGCCGGTGAT TTCGTCATCG GCGACGAGGA CTCGCCGCTG
CTGCTGGCCA GCGCGGGCGC GGGCATCACC ACCGTGCTGC CCATCGTCGA GCACCTGGCC
CGCACCCAGC CCGAACGCCA GGTGATCATC GCGCACGCCG ACCGGACGGC CGGCGACCAT
GCGCTGCGCG AGACGGTGCT GCACGTCGCC CGGCACATCG ACAACTTCAG CGCCTACACG
TGGTACGAGC AGGTCGACCC GGACGACACC GGTGCGCAGG TCGGGTACAT GGACCTGTCC
ACGCTGGACC TGCCCGCGGA CCTGCAGGTG TTCACCTGCG GCCCGCTGCC GTTCATGCGG
CACGTCCGCT CCACCCTGCT GGCCCGCGGC GTCGCTCCGG AGAACATCCG CTACGAGGTG
TTCGGGCCCG ATCTGTGGGG CCCCACCCTG GAGCGCGCCG CCGGCTGA
 
Protein sequence
MVKATAAVVA ANAEAITAVF YPNMFAAHPE LLRVFNKGNQ ASGEQSQALA ASVVAFAVSL 
IDPDAPSFDH VKTRIAYKHV SLGITPEQYL IVGKFLIGAV AEVLGDAVTP EIAAAWTEVY
WLFAVILIAE EAKLYQQAGV DPTRPLRPYR IARRIEETQD VVSLVLEPAD GGPLPTMQPG
QYVSVFVDLP DGSRQPRQYT VSSTAFGTRL QITVSRVKGV DGAPDGQVSA YLNDQAKVGD
VLDISAPAGD FVIGDEDSPL LLASAGAGIT TVLPIVEHLA RTQPERQVII AHADRTAGDH
ALRETVLHVA RHIDNFSAYT WYEQVDPDDT GAQVGYMDLS TLDLPADLQV FTCGPLPFMR
HVRSTLLARG VAPENIRYEV FGPDLWGPTL ERAAG