| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3374 |
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| Symbol | |
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| ID | 8448989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3712750 |
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| End bp | 3714234 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645042451 |
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| Product | glycosidase PH1107-related protien |
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| Protein accession | YP_003202691 |
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| Protein GI | 258653535 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000228446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00648646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACAGG TTCTCGCGCA TCGGCTGTCC GTCCGGCTCG AGCCGGATCC GGCGCGGGTG
GTGGCCCGCC TGTTCCTGCC CGGCGAGCAG ACCCAGCACG AACGCTCGCG GGTCGGGGGC
ATCGCCGACC GGGTGCTGGC CCTTCCCGAG GCGGACGTGC AGGTGCTGGC CGAGCAGGTG
CTGCGGGACT TCTCCGCGCG GCACCGTGAC CTGCCGGCCA TCCTGGACGG GCACGCCGTG
ATCATCGCCT CCCGGATCGG GGACACCCCG GTCTCGGCGG CGCGCATGCT GGTGCTGGGG
GCCAGCGTCA CCGCCGAGTA CGCCACCGAG TCCGCCGCGC TGTGCAACCC GAGCGCCGTG
CCGCACCCCG ATCAGTCCGG CCTGTTGGAC GGGCAGCTGC GGGTGGCGGT GAGCCTGCGG
GCCATCGGGG AGGGACACAT CTCCGCGATC GCCTTCGGCA CCGCCGTCAT CGGGCCCGGT
GCGCAGTGGG AGTTCCAGGA CCGGGAACGA CCGCTGGTCA CCGGCCGCAG CTCGCCGGCC
CAGTGGCGCA ACAGCCAGTT GGCCGCGGTG CTGGCCGACC ACGGCGTCGT GGACACCCTG
GGCGCGACCC TGCTGCACGA GCTGCCCGAC CTGTTCGACG TCGTCGATCT GGAGCGGGTG
CTGGCCCATG CCCCCGGCGA CCTGCTGGCC CGCCTAGGTG GACCGGCCAC CATCGACCTG
GTCCGCCGGG TGGTGTCCTC GGCCTACCGG GTCGAGTTCG ACGCCGACAC TGCGCTGGCC
CAACGGATCC TGCAGCCCAA TGCGGCCGAG GAGAGCAACG GACTGGAGGA CGCGCGGTTC
ACCCGCTTCG TCGACCCGGA CGGGGTGGTG GAGTACCGGG CGACCTACAC CGCCTACGAC
GGCCACCAGA TCGCCCCGCG GCTGCTGATC AGCTCGGATC TGCGCGAGTT CAACGCCTAC
CGGCTGGCTG GGTCGGCCGC CCGGAACAAG GGCATGGCCC TGTTCCCGCG GCTGGTCGGC
GGGCGGCACC TGGCGTTGTG CCGCACCGAC GGCGAGAACA TCAGCCTGGC CTACTCCACG
GACGGATTCC GCTGGTCCGA GCCGACCCTG CTGTACGGGC CGAGCCGGGC CTGGGAAGTG
GTGCAGGTGG GCAACTGCGG CCCGCCGGTC GAGACCGAGC GCGGCTGGCT GGTGCTCACC
CACGGGGTGG GTCCGATGCG CACCTACGCG ATCGGCGCCA TCCTGCTCGA CCTGGACGAC
CCGTCCCGGG TGATCGGCTC GCTGCGCCAC CCCCTGCTGG AGCCGATTGA CGGCGAGCGG
GACGGGTACG TGCCCAACGT GGTCTACTCC TGCGGCCCGG TCCGGCACGA CGGCCGGCTG
TGGGTACCGT TCGGCATCGA CGACGCGCGG ATCGGCGTCG CCTGGCTCGA TCTGGACGAG
CTGCTCGACG AACTCCTTGA CGGTGGGGTC ATCTCCGCGC TCTGA
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| Protein sequence | MKQVLAHRLS VRLEPDPARV VARLFLPGEQ TQHERSRVGG IADRVLALPE ADVQVLAEQV
LRDFSARHRD LPAILDGHAV IIASRIGDTP VSAARMLVLG ASVTAEYATE SAALCNPSAV
PHPDQSGLLD GQLRVAVSLR AIGEGHISAI AFGTAVIGPG AQWEFQDRER PLVTGRSSPA
QWRNSQLAAV LADHGVVDTL GATLLHELPD LFDVVDLERV LAHAPGDLLA RLGGPATIDL
VRRVVSSAYR VEFDADTALA QRILQPNAAE ESNGLEDARF TRFVDPDGVV EYRATYTAYD
GHQIAPRLLI SSDLREFNAY RLAGSAARNK GMALFPRLVG GRHLALCRTD GENISLAYST
DGFRWSEPTL LYGPSRAWEV VQVGNCGPPV ETERGWLVLT HGVGPMRTYA IGAILLDLDD
PSRVIGSLRH PLLEPIDGER DGYVPNVVYS CGPVRHDGRL WVPFGIDDAR IGVAWLDLDE
LLDELLDGGV ISAL
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