Gene Namu_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3357 
Symbol 
ID8448972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3694551 
End bp3695252 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID645042434 
Productbeta-lactamase domain protein 
Protein accessionYP_003202674 
Protein GI258653518 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0111217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.160448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGATCG CGGGATTTCC GGCCGGCTCC TTCCAGGCCA ACTGCTACGT CTTGGCCACC 
GAGGCCGGCG CCGATTGCGT GGTGATCGAT CCGGGTGAGG GCGCCGTCGC CGGTCTGCGG
CAGTTGTTCG CCGAACACCG GCTGACCCCG GTCGCCGCCC TGGTCACCCA CGGACACCTG
GACCACACCG CCGCCATCGG CGAGTTGACC CGCGAGTACG ACATTCCCGG CTACATCCAT
CCGGGCGACG AGTACATGCT CGACGATCCG CTGGCCGCGC TGTCGCCGGA GCTGCAGAGC
GCCCTGGACG GCATTTCCAT GGCCGGCCTG CGCCCGCCGA CCGTCGTGCC GGCCGTCGAC
GGGTTGACCC CGGGCCTGGC CGGCCTGCCG CTGACCGTCG ACCACGTCCC CGGCCACACC
CCCGGGTCGG TGGTCTACCG GCTCGCCCGC GACGGCGAAC GACCGGAGAT CGTCTTCACC
GGGGACACCC TGTTCGCCGG CTCCATCGGG CGGACTGACC TGACCGGCGG CAACCTGGCC
CAGGAGCTGA CCTCGATCCG CGACCGCATC CTGACCCGTG CCGACGACAC GGTGGTGTTG
GCCGGGCACG GACCGGCTAC CACCGTCGGC GACCAACGCC GCAGCAACCC GTTTCTGACC
GAGCACGCGC TGGCCCAGGC CCTGGCCGGG TCGGAGGACT GA
 
Protein sequence
MLIAGFPAGS FQANCYVLAT EAGADCVVID PGEGAVAGLR QLFAEHRLTP VAALVTHGHL 
DHTAAIGELT REYDIPGYIH PGDEYMLDDP LAALSPELQS ALDGISMAGL RPPTVVPAVD
GLTPGLAGLP LTVDHVPGHT PGSVVYRLAR DGERPEIVFT GDTLFAGSIG RTDLTGGNLA
QELTSIRDRI LTRADDTVVL AGHGPATTVG DQRRSNPFLT EHALAQALAG SED