| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3354 |
|---|
| Symbol | |
|---|
| ID | 8448969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3690987 |
|---|
| End bp | 3692018 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645042431 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003202671 |
|---|
| Protein GI | 258653515 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0982128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.108787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGC ACCCGTACCC GATCCGGGAG ATCGCCGGGC AGGCCGGGGT GAGCGCCGCG
ACGGTCGACC GGGTGCTGCA CGAGCGGCCC GGGGTACGGG CCAGCACCGT GTTCAAGGTG
CGGCAGGCGA TCGTCGACCT GGACCGGCAG CAGGCCCAGC TGCGCCTGTC CGGCCGAACC
TTCATGGTCG ACGTGGTGAT GCAGACGCCC GACCGGTTCT CCTCGGCGAT CAAGGCCGCG
TTGGAGACCC AGCTGCCGAC GCTGCTGCCG GCGGTGGTGC GGGCCCGGTT CGACTTCCGG
GAGACCGCCC GGCCGGCCGA GATCGTCAAG ACCCTGCGCG ATCTGCGGCA CCGCGGTTCG
TCCGGGGTGA TCCTCAAGGC CCCCGACCTG CCCGAGGTGG TGGCCGAGGT CGACCAGCTG
CGGGCGGCCG GGATCCCGGT CGTCACCCTG GTCACCGACC TGCCGCTGTC CAGCCGGATC
GGCTACGTCG GGATCGACAA CCGGTCGGCC GGGGCGACCG CGGCGTACCT GATCGAGCGC
TGGCTGGGCG AGCGGCCTGG TTCGGTGCTG ATCGCCATCA GTCGCAGCGT GTTCCGCAAC
GAGGAGGAGC GGGAGATCGG CTTCCGGTCC ACCCTGCGGG CCGCGTCGGA GCGGCCCCTG
GTCGAGATGA CCGACACCGA CGGGCTCGAC GACTCGGTCC GGGCCCGGAC CGTGGCGCGG
TTGACCGAGC ACCCGTCGAT CGTCGGGGTG TACTCGATCG GCGGCGGCAA CCGGGCCATC
CTGGAGGCGT TCGCCGGCCT GGACCGGCCG TGCCTGGTCT TCATCGGCCA CGACGTGGAC
CGCGACAACC GGGAACTGCT TGCCCAACAA CGGATCTCGG CGGTACTGCA CCACGATCTG
GCCGGCGACG CGCGCCGCGC CTGCCAGTTG ATCATGCAAT TCCACGGGGC GATCTCCGGA
GCGGCGACCA CGGCACCGTC CCCGGTGCAG GTGATCACCC CGTTCAACAT CCCGCCGCCG
GGGCCGACCT GA
|
|---|
| Protein sequence | MTTHPYPIRE IAGQAGVSAA TVDRVLHERP GVRASTVFKV RQAIVDLDRQ QAQLRLSGRT
FMVDVVMQTP DRFSSAIKAA LETQLPTLLP AVVRARFDFR ETARPAEIVK TLRDLRHRGS
SGVILKAPDL PEVVAEVDQL RAAGIPVVTL VTDLPLSSRI GYVGIDNRSA GATAAYLIER
WLGERPGSVL IAISRSVFRN EEEREIGFRS TLRAASERPL VEMTDTDGLD DSVRARTVAR
LTEHPSIVGV YSIGGGNRAI LEAFAGLDRP CLVFIGHDVD RDNRELLAQQ RISAVLHHDL
AGDARRACQL IMQFHGAISG AATTAPSPVQ VITPFNIPPP GPT
|
|---|
| |