Gene Namu_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3345 
Symbol 
ID8448960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3682241 
End bp3682864 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content74% 
IMG OID645042422 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003202662 
Protein GI258653506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00984287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.068906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCG ATGTGCGGGT GTGTTTCGTC GGTGACTCGT TCGTCGCGGG CGTCGGCGAC 
CCCGACCATC TCGGCTGGGT CGGGCGGCTG GCCGCCGACA GCCATGCCCT GGGCCGGCCG
CTGACCACCT ACAACCTGGG CGTGCGCCGG GAGACCACCG CCGACGTGCT GGCCCGGATG
AACGCCGAAT GCACGGCCCG GCTGCCCGCG GACTGCGCGG CCGGGGTCGT GCTGTCCCTG
GGCGTCAACG ACACCACCTT GCTCGGCGGG CGCACCCGGG TCGCCGGGCC GTATTCGGTG
GCCAACCTGG ACATGCTGAT GCGGCAGGCC CACGGGGCAC GCTGGCCGAC GCTGGTCGTC
GGCCCACCGG CCGTCGACGA CGAGTACCAG AACGACCGCA TCGCCGGCCT GGACGAGCTC
TTCGCCGCGT TGTGCCAGCG CCGCCGGGTG CCCTACGTCA GCGTGCAGTT CGACCTGCGA
CGGGAGGCGA CCTGGCGGCA GGAAGTGCGC GATGGCGACG GCGCCCATCC GGGGCGCGCC
GGGTACCAGA TCCTGGCCGA CCTGGTCCGG CCGGCCTGGG AGTCCTGGCT GGTCGGGCTG
GCCGGCGGCG GCCCGGTCTG GTAG
 
Protein sequence
MGTDVRVCFV GDSFVAGVGD PDHLGWVGRL AADSHALGRP LTTYNLGVRR ETTADVLARM 
NAECTARLPA DCAAGVVLSL GVNDTTLLGG RTRVAGPYSV ANLDMLMRQA HGARWPTLVV
GPPAVDDEYQ NDRIAGLDEL FAALCQRRRV PYVSVQFDLR REATWRQEVR DGDGAHPGRA
GYQILADLVR PAWESWLVGL AGGGPVW