Gene Namu_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3343 
Symbol 
ID8448958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3680422 
End bp3681081 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID645042420 
Productprotein of unknown function DUF1211 
Protein accessionYP_003202660 
Protein GI258653504 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000478495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0383935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGG ATCGCGTCTA TGCCAAGGAA GGCATGGAGT TCGCCCGTGC TGTGACCTTC 
TTCGACGCGA TCTTCGCGTT CGCGGTGACG CTGCTGATCA CCACCGTCGA CGACTTCAGT
CCGCAGGCCT GGTCGAGCCC GGCCGCCCTG TGGGCGGCCA ACGGCCCGTC GCTGATCAGC
TTCACCATCA GCTTCCTGGT GGTCGTCTCG TTCTGGCGGG CCAATCACCG GGTCGTCGCC
GAGATGACCG CCCTGAACTC CCGGGTCATC ACGCTCAACT GCGTCGTGAT GTTCGGCGTG
GTGCTCATCC CGTTCACCAC CGAGGCGCTG GGCAAGGTCG GCCTGCCGCT GTCGGTCGCG
GTGTACGCCG CGGTGATCGC CGTGACGGCG ATCCTGCACC ACCTGGTGCA GGACCAGGCC
GATCGGGCCC AGCTGGTCGA CCGGCAGCGC ACGCCGGCCC AGCGCCGGTG GGACTGGATC
AGCGCATCGG TGTTGCCGGC AGTATTCCTG GCCTCGATCC CGGTCGCCTA CCTGGTCAGC
CCGGCGGCCG CCGAGTACTG CTGGATCTCA CTCGTCGTGC TCAACCCGCT GGTCGGCCGA
TGGGCCGAGA CCCGCAGCCG ATCCGCCGAC GCCGGTGGCC CGCATGCCCC GACCCGTTAG
 
Protein sequence
MPGDRVYAKE GMEFARAVTF FDAIFAFAVT LLITTVDDFS PQAWSSPAAL WAANGPSLIS 
FTISFLVVVS FWRANHRVVA EMTALNSRVI TLNCVVMFGV VLIPFTTEAL GKVGLPLSVA
VYAAVIAVTA ILHHLVQDQA DRAQLVDRQR TPAQRRWDWI SASVLPAVFL ASIPVAYLVS
PAAAEYCWIS LVVLNPLVGR WAETRSRSAD AGGPHAPTR