Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3343 |
Symbol | |
ID | 8448958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3680422 |
End bp | 3681081 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645042420 |
Product | protein of unknown function DUF1211 |
Protein accession | YP_003202660 |
Protein GI | 258653504 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000478495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0383935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGGG ATCGCGTCTA TGCCAAGGAA GGCATGGAGT TCGCCCGTGC TGTGACCTTC TTCGACGCGA TCTTCGCGTT CGCGGTGACG CTGCTGATCA CCACCGTCGA CGACTTCAGT CCGCAGGCCT GGTCGAGCCC GGCCGCCCTG TGGGCGGCCA ACGGCCCGTC GCTGATCAGC TTCACCATCA GCTTCCTGGT GGTCGTCTCG TTCTGGCGGG CCAATCACCG GGTCGTCGCC GAGATGACCG CCCTGAACTC CCGGGTCATC ACGCTCAACT GCGTCGTGAT GTTCGGCGTG GTGCTCATCC CGTTCACCAC CGAGGCGCTG GGCAAGGTCG GCCTGCCGCT GTCGGTCGCG GTGTACGCCG CGGTGATCGC CGTGACGGCG ATCCTGCACC ACCTGGTGCA GGACCAGGCC GATCGGGCCC AGCTGGTCGA CCGGCAGCGC ACGCCGGCCC AGCGCCGGTG GGACTGGATC AGCGCATCGG TGTTGCCGGC AGTATTCCTG GCCTCGATCC CGGTCGCCTA CCTGGTCAGC CCGGCGGCCG CCGAGTACTG CTGGATCTCA CTCGTCGTGC TCAACCCGCT GGTCGGCCGA TGGGCCGAGA CCCGCAGCCG ATCCGCCGAC GCCGGTGGCC CGCATGCCCC GACCCGTTAG
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Protein sequence | MPGDRVYAKE GMEFARAVTF FDAIFAFAVT LLITTVDDFS PQAWSSPAAL WAANGPSLIS FTISFLVVVS FWRANHRVVA EMTALNSRVI TLNCVVMFGV VLIPFTTEAL GKVGLPLSVA VYAAVIAVTA ILHHLVQDQA DRAQLVDRQR TPAQRRWDWI SASVLPAVFL ASIPVAYLVS PAAAEYCWIS LVVLNPLVGR WAETRSRSAD AGGPHAPTR
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