Gene Namu_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3295 
Symbol 
ID8448910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3620997 
End bp3622301 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content71% 
IMG OID645042374 
Productaminodeoxychorismate lyase 
Protein accessionYP_003202614 
Protein GI258653458 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000545955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0867897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACC ATCTGATCTT CGGCCGCGAG CCGGGGGAGA CCGGCGACGT GGACGTCGAC 
GAGCTCAAGG CCGCGCTGGC CGCCAATCCC GATCCCGTCG ACGAGACCGT CGTGGCCGAG
CCGGAGCCCT CGCCGGAGGA ACGGGCCATC AGCGCCCGGC GCCGGCACCG TACCTGGCTG
GTGTTCGCCA TCGTCGTGCT GCTGGTGATC GTGGCCGGTC TGATCGCCGG GTTCGTCGTG
TGGCGGTCCG GCACCGATCA GGTGCCCGAC CACGCCGGCA CCGGCGACGC CGAGGTGGTC
GTCCGGATCC AGGGCGGCGA CGGGATCAAC GACATCGCCG CGACGCTCCA GCAGGCCGGC
GTGGTGGCCA GCACCGAGGC GTTCGTCCAA CAGGCCGCCC GTGACGGCGA CGTGCAGGCC
CTCAAGCCGG GCTACTACAA GGTGCGGCTG AACTCCTCGG CCCAGGCCGC GGCCGATGCC
CTGGTGGCCA AGGAGAACCA CGTCGGGCAC CTGCGGCTGA TCCCCGGCCG GCAGCTGGCC
GACGTCACCA CCGTCTCCAC CGATCCCAAC CAGCCCGCGG CGACCGTGCC CGGCTACATC
TCCGACATCG CCGCCGCGGC CTGTGTGCCG CTCAACGGAC AGCAGGACTG CTTCACCGCC
GACGAGCTCT GGCAGGTCGC CACGACCGCC GACCCGGCCA CCCTGGGCGT CGTGGAATGG
GCCGCCGACG CCGTGCGCGC CGCTCCGGAC CCGCGCAAAC GCCTCGAGGG CACCATCCTG
CCGGGTGATT TCGACATCCC GCCCGGCTCC ACCCCCGAGC AGGCGCTCAA GGCGGTGGTC
AGCGCGTCCG CCGCGATGTG GAACGGCACC GACATCATCG CCGACGCCGC CCAGCTGGGC
ATGACCCCGT ACCAGGCCGC GACCATCGCC TCGATCGTGG AGCGGGAGGG CATCACCGCG
GACATGCCCA AGGTGGCCCG GGTGATCGAC AACCGGCTGG CCACCGGGAT GAAGCTGGAG
ATGGACTCCA CCGTCAACTA CGCACTGGAC CGGGCCTCCA TCGCCACCAG CGCGGACGAC
CGGGCCAATC CCAGCCCGTG GAACACCTAT TACGCCGCCG GTCTGCCGCC CACCCCGATC
TCCTCGCCGG GTCCGAACGC CATCGCCGCA ACCCTCGACC CGGCCGCCGG CTCCTGGCTG
TTCTTCGTCA AGATCGACAA CACCGGCGCG TCCTGCTTCT CCATCACGGT CGAGCAGCAC
GACGCCTGCG TGGCCCAGGC GCGAGCGAAT GGAGTCTTCG GGTGA
 
Protein sequence
MNDHLIFGRE PGETGDVDVD ELKAALAANP DPVDETVVAE PEPSPEERAI SARRRHRTWL 
VFAIVVLLVI VAGLIAGFVV WRSGTDQVPD HAGTGDAEVV VRIQGGDGIN DIAATLQQAG
VVASTEAFVQ QAARDGDVQA LKPGYYKVRL NSSAQAAADA LVAKENHVGH LRLIPGRQLA
DVTTVSTDPN QPAATVPGYI SDIAAAACVP LNGQQDCFTA DELWQVATTA DPATLGVVEW
AADAVRAAPD PRKRLEGTIL PGDFDIPPGS TPEQALKAVV SASAAMWNGT DIIADAAQLG
MTPYQAATIA SIVEREGITA DMPKVARVID NRLATGMKLE MDSTVNYALD RASIATSADD
RANPSPWNTY YAAGLPPTPI SSPGPNAIAA TLDPAAGSWL FFVKIDNTGA SCFSITVEQH
DACVAQARAN GVFG