Gene Namu_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3199 
Symbol 
ID8448813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3523204 
End bp3524337 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content75% 
IMG OID645042279 
ProductPolyprenyl synthetase 
Protein accessionYP_003202520 
Protein GI258653364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000246433 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000997068 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCGAC CCGAGCCCGG TTTGCCGCAC ACTGGGCGGG TGATCGATGC CGACCGGCTG 
CACGCCGTCA TCACCGCCGA ACTGGCCCGG CGACGCGCCG ACGTTGCGGC CGTCGACCCG
CGGTTGGTCG CGGATGTCGA GCTGCTGGTC GAGTTCGTCA CCGACGGCGG CAAGCGGCTG
CGGCCGCAGT TTCTGTGGTG CGGCTGGCTG GCCGGCGGCG GCGCGGCCAC CGGCCCGGAC
GCCGATGCGG TGCTGCAGGT GGCGGCGGCG TTGGAACTGT TGCAGGCCTG CGCGCTGCTG
CACGACGACA TCATCGATCG CTCGCAGCGC CGCCGGGGGC GGCCGTCCAC GCACCGGGCG
GTCGCCAAAC GGGCGGCCGA CGCGGGCGTG GCCGCCGACC CGGAGCACCA CGGGGTGTCG
GTCGCGATCC TGCTCGGCGA CCTCGCGTTG GCCTGGTGCG ACGACCTGTT CCTGGCCGGC
GCCCTGCCGC TCGGCGCAGC CCACCGGGCC GCCCCGGTCT GGCGGGCCAT GCGCACCGAG
GTGCTCGCCG GCCAGCTGCT GGACCTGGCC GTCACGGTGT CCGCCGAGGC CGACCCGGCC
ACGCAGGAAC GCGACGCCAT GCGGGTCAAC CGGTACAAGA CCGCCGCCTA CACGATCGAA
CGGCCGCTGC ATCTGGGCGC CGCGCTGGCC GGAGCGGCGC CGGCGACCAT CGCGGCGCTG
CGCACCTACG GCACCGACAT CGGCGTCGCC TTCCAGTTGC GCGACGACCT GCTCGGGGTG
TTCGGCGACC CGGCGGTCAC CGGCAAGCCG GCCGGCGACG ACCTGGTCGA GGGCAAGCAG
ACGGTGTTGC TGGCGCTGGC CCGGGCCGAG CTGGGCCGCG CGCCGGACCG GGTGGGCGAG
TTGGCCGACC TCGATGCCGG AGTGGGACGG GCCGACGCGG ACACCGAGAA GCTGACGGCC
ATCATCGCCG GCACCGGCGC CGTCGGGGCG GTGGAGCGCC GGATCGCCGA GCTGGTGGGT
ACCGGTCTGG CGGCGCTGAG CTCGATCGGT CCGGACGGCC GGTCGGCCGT GCCCGATCCC
GTCCACGAAC GGCTGGCCGA CATGGCCGTG GCCGCGACCG CCCGCCGGCG CTGA
 
Protein sequence
MNRPEPGLPH TGRVIDADRL HAVITAELAR RRADVAAVDP RLVADVELLV EFVTDGGKRL 
RPQFLWCGWL AGGGAATGPD ADAVLQVAAA LELLQACALL HDDIIDRSQR RRGRPSTHRA
VAKRAADAGV AADPEHHGVS VAILLGDLAL AWCDDLFLAG ALPLGAAHRA APVWRAMRTE
VLAGQLLDLA VTVSAEADPA TQERDAMRVN RYKTAAYTIE RPLHLGAALA GAAPATIAAL
RTYGTDIGVA FQLRDDLLGV FGDPAVTGKP AGDDLVEGKQ TVLLALARAE LGRAPDRVGE
LADLDAGVGR ADADTEKLTA IIAGTGAVGA VERRIAELVG TGLAALSSIG PDGRSAVPDP
VHERLADMAV AATARRR