Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3199 |
Symbol | |
ID | 8448813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3523204 |
End bp | 3524337 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645042279 |
Product | Polyprenyl synthetase |
Protein accession | YP_003202520 |
Protein GI | 258653364 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000246433 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000997068 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCGAC CCGAGCCCGG TTTGCCGCAC ACTGGGCGGG TGATCGATGC CGACCGGCTG CACGCCGTCA TCACCGCCGA ACTGGCCCGG CGACGCGCCG ACGTTGCGGC CGTCGACCCG CGGTTGGTCG CGGATGTCGA GCTGCTGGTC GAGTTCGTCA CCGACGGCGG CAAGCGGCTG CGGCCGCAGT TTCTGTGGTG CGGCTGGCTG GCCGGCGGCG GCGCGGCCAC CGGCCCGGAC GCCGATGCGG TGCTGCAGGT GGCGGCGGCG TTGGAACTGT TGCAGGCCTG CGCGCTGCTG CACGACGACA TCATCGATCG CTCGCAGCGC CGCCGGGGGC GGCCGTCCAC GCACCGGGCG GTCGCCAAAC GGGCGGCCGA CGCGGGCGTG GCCGCCGACC CGGAGCACCA CGGGGTGTCG GTCGCGATCC TGCTCGGCGA CCTCGCGTTG GCCTGGTGCG ACGACCTGTT CCTGGCCGGC GCCCTGCCGC TCGGCGCAGC CCACCGGGCC GCCCCGGTCT GGCGGGCCAT GCGCACCGAG GTGCTCGCCG GCCAGCTGCT GGACCTGGCC GTCACGGTGT CCGCCGAGGC CGACCCGGCC ACGCAGGAAC GCGACGCCAT GCGGGTCAAC CGGTACAAGA CCGCCGCCTA CACGATCGAA CGGCCGCTGC ATCTGGGCGC CGCGCTGGCC GGAGCGGCGC CGGCGACCAT CGCGGCGCTG CGCACCTACG GCACCGACAT CGGCGTCGCC TTCCAGTTGC GCGACGACCT GCTCGGGGTG TTCGGCGACC CGGCGGTCAC CGGCAAGCCG GCCGGCGACG ACCTGGTCGA GGGCAAGCAG ACGGTGTTGC TGGCGCTGGC CCGGGCCGAG CTGGGCCGCG CGCCGGACCG GGTGGGCGAG TTGGCCGACC TCGATGCCGG AGTGGGACGG GCCGACGCGG ACACCGAGAA GCTGACGGCC ATCATCGCCG GCACCGGCGC CGTCGGGGCG GTGGAGCGCC GGATCGCCGA GCTGGTGGGT ACCGGTCTGG CGGCGCTGAG CTCGATCGGT CCGGACGGCC GGTCGGCCGT GCCCGATCCC GTCCACGAAC GGCTGGCCGA CATGGCCGTG GCCGCGACCG CCCGCCGGCG CTGA
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Protein sequence | MNRPEPGLPH TGRVIDADRL HAVITAELAR RRADVAAVDP RLVADVELLV EFVTDGGKRL RPQFLWCGWL AGGGAATGPD ADAVLQVAAA LELLQACALL HDDIIDRSQR RRGRPSTHRA VAKRAADAGV AADPEHHGVS VAILLGDLAL AWCDDLFLAG ALPLGAAHRA APVWRAMRTE VLAGQLLDLA VTVSAEADPA TQERDAMRVN RYKTAAYTIE RPLHLGAALA GAAPATIAAL RTYGTDIGVA FQLRDDLLGV FGDPAVTGKP AGDDLVEGKQ TVLLALARAE LGRAPDRVGE LADLDAGVGR ADADTEKLTA IIAGTGAVGA VERRIAELVG TGLAALSSIG PDGRSAVPDP VHERLADMAV AATARRR
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