Gene Namu_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3114 
Symbol 
ID8448728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3435417 
End bp3435929 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content79% 
IMG OID645042195 
ProductPeptidase M23 
Protein accessionYP_003202436 
Protein GI258653280 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00153698 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0803767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGAC TGCGGTTGTT CGCGCTGGTC GTGCTGCTGG CCGGGGTCGG CCCGGCCCCG 
CCGGCCGTCC CGGTCCCCGC TGCCGTGCCC GCTGCCACCG GGTTCGTGCT GCCGATCCCC
GGGCCGCCGC TGGTGCTCAC CGCGTTCGCG CCGCCCCCCA CCCGGTACGG CGCCGGCCAT
CGCGGGGTCG ACCTGGGTGC CGCCGCCGGC GTGGTGGTCG CCGCGGCCGG GGCCGGGCGG
GTGGTGTTCG CCGGCGAGCT GGCCGGCCGC GGGGTGATCT CGGTCGAGCA CGAGGGCGGT
CTGCGCACCA CCTACGAGCC GGTGACGGCC TCGGTCGCCG CCGGATCGCC GGTCGCCGCG
GGGCAGCCGA TCGGCACCCT GCAGGCCGGT CACCCCGGCT GCGCCCCGGC GAGTTGCCTG
CACTGGGGCG CCCGGCTGCC GGACGGGACC TACCTGGACC CGCTGGCCCT GCTGCGGCCC
TGGGCGGTGC GGTTGTGGCC GTGGGACGGC TGA
 
Protein sequence
MGGLRLFALV VLLAGVGPAP PAVPVPAAVP AATGFVLPIP GPPLVLTAFA PPPTRYGAGH 
RGVDLGAAAG VVVAAAGAGR VVFAGELAGR GVISVEHEGG LRTTYEPVTA SVAAGSPVAA
GQPIGTLQAG HPGCAPASCL HWGARLPDGT YLDPLALLRP WAVRLWPWDG