Gene Namu_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3102 
Symbol 
ID8448716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3423636 
End bp3424538 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID645042183 
ProductABC transporter related 
Protein accessionYP_003202424 
Protein GI258653268 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00319499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000545387 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCACA CGATCACCAC GGAGCACGTG GTCAAACGCT ATGGGTCGGT CGCGGCGGTC 
GACGACGTCT CGCTCGCGGT GGGGGAGGGC GAGTTCTTCG GCATCCTCGG GCCGAACGGG
GCGGGCAAGA CCACCCTGGT CGAGATGATG GAGGGGCTGC GGCAACCCGA TTCGGGCACG
ATCACCCTGC TCGGCCAGCC GGTCTGGCCC CGCAACACCG CGTTGCTGGG CCGGATGGGG
GTGCAGCTGC AGGGTTCGGC CTTCTTCGAG CGGCTGACCG CCCGGGAGCA GCTGGCCACC
TTCGGCTCGC TGTACGGCAT GCCGGCGGCC CGGGTCGACG AGATGCTCGA GCTGGTCGGC
CTGACCGACA AGGCCTCGAC CCGGGCCGAG AAGCTCTCCG GCGGGCAGGC CCAACGGCTG
TCCATCGCCT GCTCGCTGGT GCACGACCCG GACGTGGTCT TCCTGGACGA GCCGTCGGCG
GCCCTGGACC CGCAGGCCCG GCGCAACCTG TGGGACGTGC TGCGGGCGAT CAACGAGCGC
GGCAAGACGG TCGTGCTGAC CACCCACTAC ATGGACGAGG CGGAGATCCT CTGCGACCGG
GTGGCGATCA TGGACGGCGG CAAGGTGCTG CAGCTGGGCC CGCCGGCCGA CCTGGTCCGC
GACCTGGACG CGCCGGTCCG CATCTCGGTG GAGGCCGCGG CGTTGGGTCA GCAGCAGGCG
GCGGGCCTGG AGGGAGTCGA GTCGGTGTCC GGCGACACCG GCTCCACCGT CATCTCCACC
CGGCGGCCGG CCCCGGTGCT GCAGGCCCTG GCCGGGATGG ACGCGCTGGC CGGCCTGCAG
GTCCGCGGCG CCACCCTGGA GGACGTCTTC CTGCAGCTCA CCGGACGGGA GTACCGCGCA
TGA
 
Protein sequence
MAHTITTEHV VKRYGSVAAV DDVSLAVGEG EFFGILGPNG AGKTTLVEMM EGLRQPDSGT 
ITLLGQPVWP RNTALLGRMG VQLQGSAFFE RLTAREQLAT FGSLYGMPAA RVDEMLELVG
LTDKASTRAE KLSGGQAQRL SIACSLVHDP DVVFLDEPSA ALDPQARRNL WDVLRAINER
GKTVVLTTHY MDEAEILCDR VAIMDGGKVL QLGPPADLVR DLDAPVRISV EAAALGQQQA
AGLEGVESVS GDTGSTVIST RRPAPVLQAL AGMDALAGLQ VRGATLEDVF LQLTGREYRA