Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3102 |
Symbol | |
ID | 8448716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3423636 |
End bp | 3424538 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645042183 |
Product | ABC transporter related |
Protein accession | YP_003202424 |
Protein GI | 258653268 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00319499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000545387 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCACA CGATCACCAC GGAGCACGTG GTCAAACGCT ATGGGTCGGT CGCGGCGGTC GACGACGTCT CGCTCGCGGT GGGGGAGGGC GAGTTCTTCG GCATCCTCGG GCCGAACGGG GCGGGCAAGA CCACCCTGGT CGAGATGATG GAGGGGCTGC GGCAACCCGA TTCGGGCACG ATCACCCTGC TCGGCCAGCC GGTCTGGCCC CGCAACACCG CGTTGCTGGG CCGGATGGGG GTGCAGCTGC AGGGTTCGGC CTTCTTCGAG CGGCTGACCG CCCGGGAGCA GCTGGCCACC TTCGGCTCGC TGTACGGCAT GCCGGCGGCC CGGGTCGACG AGATGCTCGA GCTGGTCGGC CTGACCGACA AGGCCTCGAC CCGGGCCGAG AAGCTCTCCG GCGGGCAGGC CCAACGGCTG TCCATCGCCT GCTCGCTGGT GCACGACCCG GACGTGGTCT TCCTGGACGA GCCGTCGGCG GCCCTGGACC CGCAGGCCCG GCGCAACCTG TGGGACGTGC TGCGGGCGAT CAACGAGCGC GGCAAGACGG TCGTGCTGAC CACCCACTAC ATGGACGAGG CGGAGATCCT CTGCGACCGG GTGGCGATCA TGGACGGCGG CAAGGTGCTG CAGCTGGGCC CGCCGGCCGA CCTGGTCCGC GACCTGGACG CGCCGGTCCG CATCTCGGTG GAGGCCGCGG CGTTGGGTCA GCAGCAGGCG GCGGGCCTGG AGGGAGTCGA GTCGGTGTCC GGCGACACCG GCTCCACCGT CATCTCCACC CGGCGGCCGG CCCCGGTGCT GCAGGCCCTG GCCGGGATGG ACGCGCTGGC CGGCCTGCAG GTCCGCGGCG CCACCCTGGA GGACGTCTTC CTGCAGCTCA CCGGACGGGA GTACCGCGCA TGA
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Protein sequence | MAHTITTEHV VKRYGSVAAV DDVSLAVGEG EFFGILGPNG AGKTTLVEMM EGLRQPDSGT ITLLGQPVWP RNTALLGRMG VQLQGSAFFE RLTAREQLAT FGSLYGMPAA RVDEMLELVG LTDKASTRAE KLSGGQAQRL SIACSLVHDP DVVFLDEPSA ALDPQARRNL WDVLRAINER GKTVVLTTHY MDEAEILCDR VAIMDGGKVL QLGPPADLVR DLDAPVRISV EAAALGQQQA AGLEGVESVS GDTGSTVIST RRPAPVLQAL AGMDALAGLQ VRGATLEDVF LQLTGREYRA
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