| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3060 |
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| Symbol | |
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| ID | 8448673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3372370 |
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| End bp | 3373647 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645042143 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003202385 |
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| Protein GI | 258653229 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00405282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00103333 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCATCGAC GTTCGGTGCG AACCGCCGTC GTCGGGTTGG CCGCGGTTGC GGCACTGACG
CTGGCAGCCT GTGGATCGAA GTCAACCGAC AGCGGGTCCA CGACCAGTGC GGCGGCGTCG
GGCTCGGCGG CCGCTTCGGG ATCGGCCGCG GCCTCGGGCG GTGCGGGGGC CGGTGGCCTG
TCCATCCAGC CCCAGCTGCA GATCGACAAG GACGGCAAGG AAGTCTCTGC CTCGAGCGGC
GGGACCCCGG TCACCGCGGC CGGCAAGGGT GGGGCGACCT GCCCGGCGAC CTCGATCGCC
ATGGCCGGCG CTCTCACCGG GCCGAACGCG GCTCTGGGCC TGAACATCCT CTATGGCGCG
AACGTGGCCA TTGAGGAGCA CAACAAGGCC AACCCGAACT GCACCGTCAC CATCAAGCAG
TTCGACACCG AGGGTGATCC GCAGAAGGCC ACCCAGGTCG CGCCGCAGAT CGTCGGCGAC
ACCAGCGTCA TCGGGCTGCT CGGCCCGGCG TTCTCCGGTG AGACCGAGGC CACCGGTCCG
ATCTTCAACC AGGCCAACCT GCTGTCGCTG ACCGCGTCGG CCACCCGCGT CTCGCTGACC
ACCAATGGCT GGACCAACTT CTTCCGTGGT CTGGCCAATG ACGGCGTGCA GGGCCCCTCG
GTGGGCAAGT ACTTGGTCAA CACCCTCGGC TACAAGAAGG TCTGCGTCAT CGACGACAGC
TCCTCCTACG GTGCCGGACT GGCGGCCGAA GTCACTCCGG CTCTCGGATC GGCGGTCGAC
GGTGGTTGCA CCGGTCAGGT CAAGGTGGGC GACAAGGACT TCTCGGCGAC CGTTCAGCTG
GTCAAGGGTG CGGCTCCGGA TGCGGTGTTC TACGCCGGGT ACTACGCCGA GGCTGCGCCG
TTCGTCCAGC AGCTGCGGGA CGCCGGCGTG ACCGCGACCT TCGTCTCGGC CGACGGCACC
AACGATCCGC AGTTCGTCTC CCAGGGTGGC CAGGCCACCA AGGACGCGGT GCTGTCGTGC
CCGTGCGGTC CGGCTCCCGA GGAATTTGCG GCGACGTACG CGCAGGTCAA CAACGGGGCC
GAGCCCGGCG TCTACTCGGT CGAGGGTTAC GACCTGACCA CGATCATGCT GACCGGAATC
GACTCCGGCA TCACCGATCG GGCAGGCCTG GTCAACTTCG TCAAGAATTA CGACGGGCAG
GGTCTGGCCC GGCAGTACAA GTGGGACTCC ACCGGTGAGC TGGCGTCGTC CCTGATCTGG
ATCTACAAGG TCCAGTAG
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| Protein sequence | MHRRSVRTAV VGLAAVAALT LAACGSKSTD SGSTTSAAAS GSAAASGSAA ASGGAGAGGL
SIQPQLQIDK DGKEVSASSG GTPVTAAGKG GATCPATSIA MAGALTGPNA ALGLNILYGA
NVAIEEHNKA NPNCTVTIKQ FDTEGDPQKA TQVAPQIVGD TSVIGLLGPA FSGETEATGP
IFNQANLLSL TASATRVSLT TNGWTNFFRG LANDGVQGPS VGKYLVNTLG YKKVCVIDDS
SSYGAGLAAE VTPALGSAVD GGCTGQVKVG DKDFSATVQL VKGAAPDAVF YAGYYAEAAP
FVQQLRDAGV TATFVSADGT NDPQFVSQGG QATKDAVLSC PCGPAPEEFA ATYAQVNNGA
EPGVYSVEGY DLTTIMLTGI DSGITDRAGL VNFVKNYDGQ GLARQYKWDS TGELASSLIW
IYKVQ
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