| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3028 |
|---|
| Symbol | |
|---|
| ID | 8448641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3320065 |
|---|
| End bp | 3320988 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645042112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202354 |
|---|
| Protein GI | 258653198 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0101124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00363811 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGA CGCATCACGA CCATTCGGCC GACACCGCGG TCGCGGTCAT GCAGAACGTC
CGCCACGCGG TGCCGGTCAG CGCCGACGGC ACCCCGGTCG GGTTCAACCC GAACCGGACG
CTACGGGTGC GGGTCGAGTT GAGCCGGCAG CTGCGGCGCC GGCGGACCCA GCTGGCCCTG
GGCTTCATGG CCCTGCTGCC GGTGATCCTG GTGATCGCGT TCGCCTTCGG CTCCAATTCC
GGCGCCCGCG GCGCGGTCAA CCTGGTCGAC CTGGCCACCT CCGGGTCGAT CAACTTCGCG
CTGGTCTCGC TGTTTTTCTC GGCCAGCTTC CTGCTGATCG TGGTGATCTC GCTGTTCTTC
GGCGACACCA TCGCCTCCGA GGCGTCGTGG TCCTCGCTGC GCTACCTGCT GGCCATGCCG
GTCCCCCGGG TCCGGCTGAT CCGGCAGAAA GTGCTGGTGG CCGGCCTGCT GTCGCTGTCC
GCGCTGCTCG TCCTGCCGAT CAGCGCGCTG ATCGTCGGCG GGTTCGCCTA CGGGTGGAAC
CCGCTGTCCA CCCCGGTCGG TGAGCAGTTC ACCTTCGCCG ACGGGCTGCT GCGGATCGCG
CTGATCGTCA GCTACGTGGC CATCCAGCTG ACCTGGGTGG CCGGGCTGGC GCTGATGCTC
TCGGTTCTCA CCGACGCCCC GCTCGGAGCG GTCGGTGGCG CCGTGCTGAT CTCGATCCTG
TCCCAGATCC TCAACCAGAT CGACGCCTTG GGCGACCTGC GCAACTACCT GCCGACCAAG
TACGCGTTCG CCTGGACCGG GGCCCTGGTC GACCCGATCC GCTGGGACGA TATGGTCCGC
GGCGGTTTCC TGAGCCTGGC TTACGCGGTG GTGTTCGCGA CCATCGCGGT CCTGCACTTC
CGGCGCAAGG ACGTGACCAG CTAG
|
|---|
| Protein sequence | MSPTHHDHSA DTAVAVMQNV RHAVPVSADG TPVGFNPNRT LRVRVELSRQ LRRRRTQLAL
GFMALLPVIL VIAFAFGSNS GARGAVNLVD LATSGSINFA LVSLFFSASF LLIVVISLFF
GDTIASEASW SSLRYLLAMP VPRVRLIRQK VLVAGLLSLS ALLVLPISAL IVGGFAYGWN
PLSTPVGEQF TFADGLLRIA LIVSYVAIQL TWVAGLALML SVLTDAPLGA VGGAVLISIL
SQILNQIDAL GDLRNYLPTK YAFAWTGALV DPIRWDDMVR GGFLSLAYAV VFATIAVLHF
RRKDVTS
|
|---|
| |