Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3001 |
Symbol | |
ID | 8448614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3292796 |
End bp | 3293164 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645042085 |
Product | hypothetical protein |
Protein accession | YP_003202327 |
Protein GI | 258653171 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00623326 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000358597 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACGCAGC CGCTGGAGCA CCTGAGTTTT GACCGACCGG ACGAGGTGCG TGGCGGCGAC CGGTGGCGAC TGGAACTGCT GAATCTGGCC CGCGGGGCCC AGGTCGGGCG GCTGACCATC CAGCCGGGCT GGAAATGGTC CGTCGATGTC AAGCCGGTGG CCGGCACCGA CCTGTGCCTG GCTCCCCACC AGCAATATCA GCTGTCCGGG CGGATGCACG TGATCATGCA GGACGGCACC GAGCTCGATA CGGCCGCTGG TGAGGTGACC ACGCTGCCGC CGGGTCACGA TGCCTGGGTC GTCGGCGACG AGCCGGTCGT CGCCGTCGAC TGGCAGGGCG CCTCCATCTG GGGCCGCCCG CAGCAGTGA
|
Protein sequence | MTQPLEHLSF DRPDEVRGGD RWRLELLNLA RGAQVGRLTI QPGWKWSVDV KPVAGTDLCL APHQQYQLSG RMHVIMQDGT ELDTAAGEVT TLPPGHDAWV VGDEPVVAVD WQGASIWGRP QQ
|
| |