Gene Namu_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2977 
Symbol 
ID8448590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3264358 
End bp3265494 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content76% 
IMG OID645042061 
Productpeptidase M50 
Protein accessionYP_003202303 
Protein GI258653147 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00144349 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00562837 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGCCGCA TCGCCGGGGT CCAGATCCTG CTCACCCCGT CCTGGATCGC CTCGGTCGTG 
GTCATTGCCG TCCTCGGCGT CCCGGTCGTC GAGCGGGTCG TCCCGCAGAC CGGCACCCCG
CTCGCGGTGC TGGTCGCCTC GCTGTTGGGG GTGCTGGTCG GGGTCAGCGT GCTGGCCCAC
GAACTCGGCC ACTGCGTGGT CGCCCGGTGG GTCGGCATCG AGGTGATCGC GGTGCGGCTC
TACCTGCTCG GCGGGGTCAG CGAGCTGGCC GCCGGGCCAC GGACCGCGCG GGCCGAGGCG
CTGGTCGCGG CGGCCGGGCC GGCCGTCTCC GGGTTGCTCG CCGGCGTCTT CTGGCTGGCC
CTGCAGCCCA CCCAGGCGGG CACCCTGGGC TGGCTGGTCC TGTTGCTGCT CGCCCTGTCG
AACCTGATCA TCGCCCTGTT CAACCTGCTC CCGGCGCTGC CGCTGGACGG CGGGCGGGTG
ATCCGCGCGG GCATCTGGGG CGCCTCCGGC AGCCGCCGGG CCGGCACCGT CGCCGCCGTG
GTCGGCGGGT ACCTGCTGGC CGCCGCGCTG GCCGGCTGGG CCGTCTGGCA ACTGGTCCGG
GAGGGGTCGA CGGCGCTGCT GCCGGCCGGG ATCGCCGTAG TCATGGCCGC TTTCGTGGTC
GTCGGGGTGA TCGCCGAGGG CGGCGATGTG GGCTCCGATG ACTCCGAGAC CGGCGAGCCG
ATCTCGACCT CGTGGCCGGC CGGCGTCGCG CTCGCCTCGA TCTCCCGGCC GGTGGTCCGG
CTCGGGACCG ACGTACCGGT GCACGCCGCG CTGGCGGCCG CGGCCGCGGG CGCGGTCATC
CTGGTCCAGG CCGACGGCAT CGCCCGGGGC GTACTGGACG AGCCGGCCGC CCGCGAGCTG
GCCGGACGGG ACCCGGCGGC GCCCGCATCC CTGGTCACCC GGCCCATCAC CCCGGCCGCG
ATCGTCTTCG CCGGCGAAGA CCCCGACGAG GTGCTGGCAC GGGCGCGCCG CGCGCCGATC
GATCCGTTCG TGCTGGTCGA CGCGTCCGGC ACGCCGACGG GGATCGTCCG CGCCGCGGAC
CTGCTGGCCG TGCCCCGGGC CCATCACAAC CGAACCATCG GAAGGAAGAG CGGTTGA
 
Protein sequence
MGRIAGVQIL LTPSWIASVV VIAVLGVPVV ERVVPQTGTP LAVLVASLLG VLVGVSVLAH 
ELGHCVVARW VGIEVIAVRL YLLGGVSELA AGPRTARAEA LVAAAGPAVS GLLAGVFWLA
LQPTQAGTLG WLVLLLLALS NLIIALFNLL PALPLDGGRV IRAGIWGASG SRRAGTVAAV
VGGYLLAAAL AGWAVWQLVR EGSTALLPAG IAVVMAAFVV VGVIAEGGDV GSDDSETGEP
ISTSWPAGVA LASISRPVVR LGTDVPVHAA LAAAAAGAVI LVQADGIARG VLDEPAAREL
AGRDPAAPAS LVTRPITPAA IVFAGEDPDE VLARARRAPI DPFVLVDASG TPTGIVRAAD
LLAVPRAHHN RTIGRKSG