Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2949 |
Symbol | |
ID | 8448562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3229794 |
End bp | 3231296 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645042034 |
Product | Na+/solute symporter |
Protein accession | YP_003202276 |
Protein GI | 258653120 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0128221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000189844 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTCG TCATCATCGC CGTCTATATC GGCGCCATGA TCGGCATCGG CTTCTACGCC AAGGGCAAGG CCACCAGCGA GTCGGACTTC CTGGTCGCCG GACGCCGGCT CGGCCCGATG CTCTACGCCG GCACGATGGC CGCCGTGGTC ATCGGCGGCG CCTCCACCAT CGGTGGCGTC GGCCTGGGCT ACGAGTACGG CCTGTCCGGA CTCTGGCTGG TCTTCTCCAT CGGCTGCGAC ATCCTGTTCC TGAGCCTGGT CTTCGCCGGC CGGATCAACC GGGCCGGCGT CTACACGGTC AGCCAGCTGC TCGAACTGCG ATACGGGCGC GGCGCCAGCC TGCTGTCCGG GATCGTCATG TGGGCCTACA CCCTCATGCT GGCGGTTACC TCCACCATCG CCTACGGCAC CGTCTTCGGC GTGCTGTTCG ACATCGGCAA GGTCCCGTCG ATCATCATCG GCGGCGCCGT CGTGGTCACC TACTCGGTGC TCGGCGGCAT GTGGTCGATC ACGCTCACCG ACTTCGTGCA GTTCATCATC AAGACCATCG GCATCTTCGT CCTGCTGCTG CCGGCCGCCC TGATCAAGGC CGGCGGCTTT GCCGGGCTGG CCGAGAAGCT GCCGGACACG GCGTTCTCGT TGACCACCAT CGGCGGCGGC ACGATCGTGA CCTACTTCGT CATCTACTTC TTCGGCCTGG TCATCGGCCA GGACATCTGG CAGCGGGTCT TCACCGCCCG CAGCGACAGC GTCGCCAAAT GGGCCGGCAC CGCCTCCGGC GTCTACTGCC TGCTCTACGC GGTGGCCGGG GCGCTGATCG GGATGAGCGC CAAGGCGATC CTGCCGAACC TGGCCGAGCG GGACGACGCC TATCCCGCGG TCGTCCAGGC CGTGCTGCCG GTCGGCGTGG CCGGCCTGGT CATCGCCGCC GCCCTGGCCG CCATCATGTC CACCTCCAGC GGCGCCCTGA TCGCCACCGC GACGGTGGCC AAGGAGGACA TCGTGGCCTC CTTCCGGCGG CGCCGGCACC CGGCCGCCAC CGGCGCCTCG GCCGGCACCG CCGACGAGTC CGCGACGCCC GCCCAGGAGC ACGACGAGGT CTCCGGCAGC CGTTGGTACA TCTTTGGTTT CGGCCTGCTG ACGATCGGCA TGGCCTGCGT CATCAGCGAC GTCATCGCCG CGCTGACCAT CGCCTACGAC ATCCTCGTCG GCGGCCTGCT GGTGGCCATC CTGGGCGGCC TGATCTGGAA GCGCGGCACC ATCACCGGCG CGCTGGCCTC CATCGGCGCC GGCGTGGTGG TCACCCTGGG CACCATGGCG TACTACGGCG ACATCTACGC CAACGAGCCG ATCTTCGCCG GCCTGATCGT CAGCCTGCTC GCCTATGTGG TGGTCAGCCT GATCACCCCG GCCACCCCGG AACCGATCCG GGCCGAATGG GACCGCCGGG TCAACCGCAA GCGCACCGCC GCCACCTCCC CCGCCGCGAC CCAGCAGGCC TGA
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Protein sequence | MDLVIIAVYI GAMIGIGFYA KGKATSESDF LVAGRRLGPM LYAGTMAAVV IGGASTIGGV GLGYEYGLSG LWLVFSIGCD ILFLSLVFAG RINRAGVYTV SQLLELRYGR GASLLSGIVM WAYTLMLAVT STIAYGTVFG VLFDIGKVPS IIIGGAVVVT YSVLGGMWSI TLTDFVQFII KTIGIFVLLL PAALIKAGGF AGLAEKLPDT AFSLTTIGGG TIVTYFVIYF FGLVIGQDIW QRVFTARSDS VAKWAGTASG VYCLLYAVAG ALIGMSAKAI LPNLAERDDA YPAVVQAVLP VGVAGLVIAA ALAAIMSTSS GALIATATVA KEDIVASFRR RRHPAATGAS AGTADESATP AQEHDEVSGS RWYIFGFGLL TIGMACVISD VIAALTIAYD ILVGGLLVAI LGGLIWKRGT ITGALASIGA GVVVTLGTMA YYGDIYANEP IFAGLIVSLL AYVVVSLITP ATPEPIRAEW DRRVNRKRTA ATSPAATQQA
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