| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2921 |
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| Symbol | gabD2 |
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| ID | 8448534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3193965 |
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| End bp | 3195569 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645042006 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003202248 |
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| Protein GI | 258653092 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000177812 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00007682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGTTG ATGTGTCCGG GGATGTCGCC CGCCGCCCGT CGGCGGCGAA TCCGGGCCGG
CCGGACTGGC TCACCGGCCC ACTCGCCCAA CGCCTCGCCG GCCTGATCAC CGCGTCGGGG
GCCACCCGGG AGGCGGCGTC GGCGCCGTAC ACGCTGACCC CGACGGTGGA GCTGCCGCGG
TCGACGAGCG CCGATGTGCA GGCCGCGTTC ACCCGGGCCC GCGCCGCGCA GCGGGACTGG
GCGCAGCGAC CCGCCGGCGA GCGGTCGGCG GTGGTGCTGC GGTTCCACGA CCTGCTGCTC
GACCGGCAGG ACCAGGTGCT GGACCTGATC CAGTGGGAGA ACGGCAAGTG CCGCCAGGAC
GCCTTCCTCG AGGTGGCCGA CATCGCGTTG ACCGCCCGGT ACTACGGGCG GCGCGCGCCG
GGTCTGCTCA AGCAGCAACG CCGGCGGGGC GCCTTTCCGG TCCTGACCCG GACAGCGGAA
CTGCGCCACC CCAAGGGGGT GGTCGGGGTG ATCTCCCCGT GGAACTACCC TCTGTCCCTG
GCCGCCGGGG ATGTCATCGC GGCCCTGCTC GCCGGCAACG CCGTCGTGCA CAAGCCCGAC
AGCCAAACCG CTCTCACCGC GTTGTGGGCG GTGGCGCTGA TGATCGAGGC CGGGTTGCCG
GCCGACCTGT GGCCGGTGGT GGTGGGATCC GGGACGGAGC TGGGCGAGCC GTTGCTGGCC
GGCGCCGACT ATCTGATGTT CACCGGTTCG ACCGAGACCG GGCGGTGGAT GGCCAGCCGC
GCCGGGCAGC GGTTGATCGG CAGTTCCCTG GAACTGGGCG GCAAGAACGC GCTGCTGCTG
CTCGACGATG CCGACCTGGA TCGGGCCGCC GCGGGCGCGG CCCGCGCCTG CTTCGCCTCC
TCCGGTCAGC TGTGCATCTC GATGGAACGC ATCTACCTGC CGGTCTCACG GCAGCAGGCT
TTCCTGGACC GGTTCCTGGA CCGGGTCGGC GCGATGCGGT TGGGCTCGAG CTACGACTAC
GAGCCGGACA TGGGTTCGCT GACCACCGCA GCTCAACTGG ACACGGTCAC CGCGCACGTG
GCGGACGCCC GCGCCCACGG CGCCACGGTG CTGACCGGCG GCCGAGCCCG CCCCGATCTC
GGGCCGCTGT TCTACGAGCC GACGGTGCTG AGCGGGGTCA CCGATCAAAT GATGTGTTTC
GCCGGTGAAA CCTTCGGCCC GGTGGTCGCG GTGTACCCGT ACCAGAACCT GCCGGACGCC
ATCGAGTCGG CCAACGCGAC CCCCTACGGG CTCAATGCCA GCGTGTGGAC CGGCAACCCA
GCGCGGGGCC GGGCGGTGGC CGCGCGGCTG CACGCCGGCA CGGTGAACGT CAATGACGGC
TACGCGGCCG CCTGGGCCAG CCTCGACGCG CCGATGGGCG GCATGGGCGA CTCCGGGCTC
GGCCGCCGCC ACGGTGCGGA AGGGCTGCTC AAGTACACCG AGGCCCAGAC CATCGCCGAG
CAGCGAATTC TCGGGTTCAC GCCACCGCCC GGAGTGTCCT ACCGGGCCTG GGCCAAGGGC
CTGACCATGA CGCTGAAAGC GATGAAGAAG GCGGGACTGT CATGA
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| Protein sequence | MSVDVSGDVA RRPSAANPGR PDWLTGPLAQ RLAGLITASG ATREAASAPY TLTPTVELPR
STSADVQAAF TRARAAQRDW AQRPAGERSA VVLRFHDLLL DRQDQVLDLI QWENGKCRQD
AFLEVADIAL TARYYGRRAP GLLKQQRRRG AFPVLTRTAE LRHPKGVVGV ISPWNYPLSL
AAGDVIAALL AGNAVVHKPD SQTALTALWA VALMIEAGLP ADLWPVVVGS GTELGEPLLA
GADYLMFTGS TETGRWMASR AGQRLIGSSL ELGGKNALLL LDDADLDRAA AGAARACFAS
SGQLCISMER IYLPVSRQQA FLDRFLDRVG AMRLGSSYDY EPDMGSLTTA AQLDTVTAHV
ADARAHGATV LTGGRARPDL GPLFYEPTVL SGVTDQMMCF AGETFGPVVA VYPYQNLPDA
IESANATPYG LNASVWTGNP ARGRAVAARL HAGTVNVNDG YAAAWASLDA PMGGMGDSGL
GRRHGAEGLL KYTEAQTIAE QRILGFTPPP GVSYRAWAKG LTMTLKAMKK AGLS
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