| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2919 |
|---|
| Symbol | |
|---|
| ID | 8448532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3192389 |
|---|
| End bp | 3193327 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645042004 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003202246 |
|---|
| Protein GI | 258653090 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000384293 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000191262 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCCG CGCTGGCGGT CGGCCGGCAT TGGGCCTTCG ACTCCTGGCT CGGGGTGAGT
GCGGTCGCCC TGGCGCCCTG GAGTGTGCTG CCGGCCGGCG TGGCGGTGCT GGGTCTGCTG
GCCCTGAGTG GCTGGCGCGC GGCAGTACCG GCCACGGTGC TGGTGGCGCT GGCCAGTTGG
CCGCTGATCG TCACCGCTGT CCCCGGATCG CAGTCGGCAT CGGCCCCGAT CGTCACCGTG
ATGACGGCCA ACACCGAGCA CGGACAAGCC GATCCGAACG CGCTGGTCGC CACCGTCACC
ACCCGGGGTG TCGACGTGCT GGCGCTCCAG GAGTTGACGG CCGGCTCCAT CGACGCCCTG
TCGTCCGCGG GCCTGGACCG GGTGCTGCCC TACCGTTCGA TCGCGGTGCA ACCCGGCGGC
ACGGACGTCG GGCTGTGGAG CCGCTATCCG CTGACCGACA CGCACATGCC GACCGGCTTC
ACCGTCAATC CGGTGCAGGC GCGGATCACC GTGGGCGGGC ACCAGGTCAG CGTGATCGCG
TTCCACAGTC AGGCGCCGGT GAGCGAGCGG ACCACCCAGG CATGGCAGTC CGACCTGCGC
CGGCTGGCCG ACATCATGCG CACCGCCGGC GCTTCCACCA TCGTGGCCGG CGACTTCAAC
GCCACCCGAG ACCATCTCCA GTTCCGCGAT CTGCTGGCGG CCGGCTACAC CGATAGCGGC
AGCGACGCGG GCGCCGGGCT GCTGAGAACG TATCCGACCG ACCGATTCTG GGGGCCACTG
GTCGGCATCG ATCACGTGCT GGTCGGTGCC GATCTGGTCG GCGTCGCGGT CGGCACGGTG
GCGCAGCCGG GATCCGATCA CCGGGCCGTG GTCGCCGCGG TGGCACCCCG GGACGCAGCC
GCGGCGATGC TCGGCTCCGG CGGCCGACCG TCTGGCTGA
|
|---|
| Protein sequence | MAAALAVGRH WAFDSWLGVS AVALAPWSVL PAGVAVLGLL ALSGWRAAVP ATVLVALASW
PLIVTAVPGS QSASAPIVTV MTANTEHGQA DPNALVATVT TRGVDVLALQ ELTAGSIDAL
SSAGLDRVLP YRSIAVQPGG TDVGLWSRYP LTDTHMPTGF TVNPVQARIT VGGHQVSVIA
FHSQAPVSER TTQAWQSDLR RLADIMRTAG ASTIVAGDFN ATRDHLQFRD LLAAGYTDSG
SDAGAGLLRT YPTDRFWGPL VGIDHVLVGA DLVGVAVGTV AQPGSDHRAV VAAVAPRDAA
AAMLGSGGRP SG
|
|---|
| |