| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2895 |
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| Symbol | |
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| ID | 8448508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3165896 |
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| End bp | 3166717 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041982 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_003202224 |
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| Protein GI | 258653068 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0579203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000304187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCCCT ATCCAGCCCT GTCCGGCCAG ACGCTGGTCG TGCCGATCGT GGGCGACCCG
ATCGCCCAGG TGAAATCCCC GGACGGCATC ACCCGCGAGT TCGCCGCCCG TGGGTGTGCC
GGCGTTGTCG TCCCGATGCA GATCAGCGGC GACCACCTGG ACGCGCTCAT CGCCGGATTG
ACCCCCTCGG GCAGCATCGG CGGCCTGATC GCCACCGTGC CGCACAAGTT CGGCGTGGCC
CGGCACTGCG GCACCCTGAC CGACCGGGCG GCGTTCCTCG GCTCGGTGAA CGTGGCCCGG
CGCAACGCCG ACGGCACCTG GCACGGCGAC CAAGTCGACG GAGCGGCCTA CGTGTCGGCG
GTGCGCGCGA ACGGCGGTGA CCCGGCCGGC CGGCGGGTGC TGCAGATCGG CGCCGGCGGG
GCGGGCACCG CGATCGCTCT CGAGCTGTTG GCCAAGGGCG CGGCGGAACT GGCACTGCAC
GATGCCGACC CGGTCCGCCG GGACAGCCTC ATCGCCCGGC TGCAGTCCCG GTTCCCGGAC
CGCGTGGTCG GCGTCGGCAC CCCTGACCCG ACCGGATTCG ACCTCGTCGC GCACGCCACT
CCGATGGGTA TGCGCCCCGG CGACCCCTTG CCGATCCTGA TCGAGCAGCT CACGCCGGAC
ACCTTCGTCG CCGATGTGGT CACCCAACCG GCCGTCCCGC CGCTCATCGA GGCGGCCCGG
GCGCTGGGCT GCGGCACCTC GACGGGCGGC GACATGTTCA CCGCCGTCGC CCAGCTGATC
GTCGACTTCC TGCTGGCCGA CGGCCCGCTG GCGGGACGGT GA
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| Protein sequence | MNPYPALSGQ TLVVPIVGDP IAQVKSPDGI TREFAARGCA GVVVPMQISG DHLDALIAGL
TPSGSIGGLI ATVPHKFGVA RHCGTLTDRA AFLGSVNVAR RNADGTWHGD QVDGAAYVSA
VRANGGDPAG RRVLQIGAGG AGTAIALELL AKGAAELALH DADPVRRDSL IARLQSRFPD
RVVGVGTPDP TGFDLVAHAT PMGMRPGDPL PILIEQLTPD TFVADVVTQP AVPPLIEAAR
ALGCGTSTGG DMFTAVAQLI VDFLLADGPL AGR
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