Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2643 |
Symbol | |
ID | 8448255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2890442 |
End bp | 2891608 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645041738 |
Product | hypothetical protein |
Protein accession | YP_003201981 |
Protein GI | 258652825 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0558734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00643545 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTTCGGGA CCGTCATTGC CGTCACCGTC CTGTCGGCGA TCTTCATGAT CGTGCCGGAC GGGCGGCTGC TGTCCCGGCG ATGGCGATTC GCCGTCGCCG TCCCGATCGC CGCGCAGGTG CTGTGGTGGG TCGGGGTCGT CACGACCTCC CTCGCGGTCG GCGACCCGGG CAACGATCTC GAATCGGGCG CCGGCGTCCA ACCGGCGGCT TTCGCCGGCT TCGCCGGGAC GCTGCTGTCG ATCCTGCTCG GGGCTGTCGC TCTGGGCCTG CGCCTGCGAC GATCCACCGG TCAACAGCGC CTGCAACTGC GTTGGATCAC CTCGGGGGCT GTGGCGCTCG CGGCGACCTT CGTGCTGTTC GCGCTGAGCG ACCTGATCCC GGAGCCGACG CCGTGGATCC TGCCGGTGGC GACATGCCTT GCCTACATTT ATTTCTCGGT GACCGTGGGC GTGGCCATCT TCCGCTACCG TCTCTCTGAC CTCGACGTGA TCCTGAGCCG GGCAATCGTC CTGGGCGTTC TCGCCGTGTT CGTCACCGTC GGGTACATCG TGGTCGTGGT CGCCATCGGC GCCGTGCTGA TGGCCGTCGG CGCGCCCGGA TCGACCCTCT ACTGGCCGTC GTTGGTGGCG ACCGCGCTGG TCGCAGTCGC GTTCCAGCCC CTGCGCAGCC ACGTCCTGCG GCTGGCGGAT CGGCTGGTCT ACGGCGACCG GGCCGTGCCC TACGAGGCTC TGGCCACCCT GAGCCGGCGG CTCGCGGACA GTCCATCACC CGACGTCCTG CCGGCCAGGG TCGCGGAGGC GACCGGCCGG GCCGTCGGCG CGGCCGGCGT GGTGGTCCGG CTCGGTAGGC GCGGAGAACC GGCATTGACA CGTCGTGCGG TCTGGTCGGC CACTGGTTCC TCGCCCCGGT CGGGGCCGGT CGATGGGCCA TCGCTGGCGC TGGCCGTGCT GGACTCGCGG GAGCAGGTCG GCGACATCGA GATCATCATG CCACCTGGCC GAGCGTTGCG GACCTTCGAG CGGCGCCTGC TGGAGGACGT TGTCGCGCAG ACCGGCGTGG CCTTCCGAAA CGCGCTGCTG GAGACGGAAC TGGCGGCGAG GGTCCAGGAG GGCCGCGCCC AATCCGCGGA ACTCGAGTCC TCCCGGCGCC GGTTGGTGGG AGTCTAG
|
Protein sequence | MFGTVIAVTV LSAIFMIVPD GRLLSRRWRF AVAVPIAAQV LWWVGVVTTS LAVGDPGNDL ESGAGVQPAA FAGFAGTLLS ILLGAVALGL RLRRSTGQQR LQLRWITSGA VALAATFVLF ALSDLIPEPT PWILPVATCL AYIYFSVTVG VAIFRYRLSD LDVILSRAIV LGVLAVFVTV GYIVVVVAIG AVLMAVGAPG STLYWPSLVA TALVAVAFQP LRSHVLRLAD RLVYGDRAVP YEALATLSRR LADSPSPDVL PARVAEATGR AVGAAGVVVR LGRRGEPALT RRAVWSATGS SPRSGPVDGP SLALAVLDSR EQVGDIEIIM PPGRALRTFE RRLLEDVVAQ TGVAFRNALL ETELAARVQE GRAQSAELES SRRRLVGV
|
| |