Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2595 |
Symbol | |
ID | 8448207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2841342 |
End bp | 2841998 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645041693 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003201936 |
Protein GI | 258652780 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000390458 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00180541 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCGAGCA CGGTCACCCG CGCCGAACGC ACGCTCGCCA CCCGGCGACG GATGGTGCAA GCGGCGTACG ACCTGTTCTG CCGCGACGGG TACCTGGGAG CGACGATCTC CGCGATCGCC GATCGCGCGG GCGTCGCGGT GCCGACGATC TACTACACCT TCCACACCAA GTCCGCGCTG CTCGGTGATG TGCTCGGTGC TGCCATCATC GGTTTCGACC GCTGGCGGGA GCCCCCGCCC GAGCCGATCG TGATGGCCGA GGTGATGGGG TGGCACCGAT GGTGGAGCGA GTTCCAGGCC GCGCCCACGT CGGAGATGGC GCTGTGGGTC TTCGTCCGCC ACGGCGCCGC CATACTGCAG CGGGTCGCCC CGCTGGTGCC CGCACTCCAC GTGGCGACCG GGGATCCGGA GGCCGGCCAG ATCGTCCGTA CCAGCGAGGA GAGGCGGGTC GAGTCCTACC GCGAGGTGGT GAACGTGCTC GCCGACAAGC CCGCCGGGCT ACGCGAGGGC CTCACTAGGG CCAGCGCGAC CGATGTCTTG GTCGCCCTGT TCAGCGCAGA GGCCTACCAA TGCCTGGTGC TTCGCGGGTG GTCGCATCGC CGGTGTACAG CGTTCTTCGC CGAGTTGCTG TCCACGCAGC TGCTCGCCCC AGGCTGA
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Protein sequence | MPSTVTRAER TLATRRRMVQ AAYDLFCRDG YLGATISAIA DRAGVAVPTI YYTFHTKSAL LGDVLGAAII GFDRWREPPP EPIVMAEVMG WHRWWSEFQA APTSEMALWV FVRHGAAILQ RVAPLVPALH VATGDPEAGQ IVRTSEERRV ESYREVVNVL ADKPAGLREG LTRASATDVL VALFSAEAYQ CLVLRGWSHR RCTAFFAELL STQLLAPG
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