| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2545 |
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| Symbol | |
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| ID | 8448156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2796044 |
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| End bp | 2798533 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645041649 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003201893 |
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| Protein GI | 258652737 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000108599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00117981 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTGACC GCGGGCCGAC GATCGCCCTC GGACAGCGGC TCGTCTTCCA GGAGCGGACC
TGGACGGTGG TCGCGGTGAC CGGCTCCGGG GTGACGTTGC AGGGCCAGTC CGGGCAGGTG
ACCGCGGTAC TGGTGACGCA TCTGGTGGCG TCCGACGGGT TCGAGGTGCT GGACGAGCCC
GCGCCGGTTC CGGTCCCACC GGATTCGCTG TTGGACGGTC TCGATCAGGG TGAGCGTGAC
CGGGTCCGGC GGCTGGAGCG CCACATCGGG CAGGTCGACA CCGGGGTGCT GCCCGGCGAC
GAGGATCCGA TCCGCGACGA CCGCTACGAC CTGCGCACCA CGACGGTGAA CGAGCGGGTC
CACGCGAAGG TCGCCGAGTT GAAGGGGACG GATCTGGCCG TGAGCGTCCG GCAGTTGCAC
CGGCTGCGCG TCGCGTACCG CGCCGACGGC GCGATCGGAC TGGTGGAGCG GCGGGTGCGG
GATCGGTTGG CCGGTCGTGA CCCGCTGGCC GCCGCGGACG GACGGGTGCT GACCGCGTTG
GCGGAGGCGA TGACCGGGCA GGCGGCGCAG TCGACGGTCT CCCGCAAGAC GACGTTCACC
CGGGTGCGGG CCGCGCTGAC CGCCGAACAC GGCGACGGGC TGATGATTCC GAGCGATCGG
GAGTTGTACC GGTTGGCGGC AGCGCTGGAC CGAGGCCGGC ACACCTTCGG TGCGGCGACG
ACCCGACGCA CCCGCGACAA CCGGCCGGAC CGGCCGTTCA CCGCGTCGGT GCTGGTGCGG
CCGGGGGAGC AGGTGCAGAT CGACACGAAC ACGATCGACA TCCTGTGCCG GTACCCCGAC
GGCGTCGCCC GACGAGCGGA GCTGACCATG GCGGTCGACG TCGCCACCCG CAGCATCCTG
ACCGGGGTGA TCGCACCGTC CACGAAGGCG GTCGACGCGG TCGCCGTGCT GGCCCGCCTG
CTGGTCCCGC AACCGCTGCG GCCGGGATGG CCAGAGACGC TGCTGCTGGC GCAGTCGGTG
CTGCCGTTCG ACCGGCTGGT GGGCATCGAC GCCCGGTTCG AACTGGCCCA GGCGCTGCCG
GTGATCCTGC CCGACACCCT GGTCTGCGAC CGCGGCTCGG TGTACATGGC GGAGACATTC
CGGCGGGCCT GCCGCCATCT GGGGATCTCG GTGCAGCCGG CCCGCCCCTA CACGCCCACC
GACAAGGCCA CGGTGGAAAG AACATTCGGA TCGATCAACA CCCTGTTCTG CCGGCACATC
CACGGGTATG TGGGGTCCAG CGTAGCCATG CGTGGGAAGG ACCCGGCAGC CGAGGCGGTG
TTCACCTTGG CGCAGCTGCA GGACCTGTTC GACGAGTGGG TAGTCGCGGT CTGGCAGAAC
CGCCCGCACG AATCACTCAC GACGGTGTGG GGTGAGAACC GGCCGGTGTC CCCGAACGAG
GCCTACGCAG CGATGGTCGC CCGCAGCGGC TACGTCCCGA TCCCACGGTC TACCGCGGAC
TATGTCGAGC TGCTGCCGGG CGAGTGGCGG CGGATCAACG AGGAGGGCGT CACCCTGCAC
AACCGGGTCT ACGACAGCGC CGAGCTGAAC CCCTACCGGC GGGCCGATTC CGGGGTCACC
GCGCAGAACG GCCGGTGGGA ACTGCACCAC GACCCGTACG ACATCACCCA GATCTGGATC
CGGAACCACC ACAGCGCCGG GTGGATCACG CTACCTGGGT GCACCGGGAC CTGGTCCGGC
AACCGTTCAG CGCGACGATC TACGAAAACG TCCGGGCGCG CAGCGTCGCC GCCGGCGAAC
CTGTCCGGGA CGACTACATC GCCCGCCGGG TCGCCGAGTT GCTCAGGAAC CCGGACCGGA
CCGGCCAATC ACCGGCGGAC CGGCGGATCG TGGCGCAGGA GACGAACACG TCCCCGCGGT
CGTCAATATC CACATCGTCG GAGGGCGCCG AGATTGCAGA CGACGACCGG CCCGACCAGA
GGATGGCCGG CGAGCACCCG GACACTGACG CGGCGGCCAC CCTCAGCGAG GAAAGCGACA
ACGGCGGGGA CCGTGTGCTG GCCGGGTTCG GAATGTTCGA CCCGGCCGCC GGCGACTGGG
GTCTGCGGTG ACGGCGCCGC CGGTCGGCCC GCTGACCAGC CTGACCGGGT GGCGAGCGTT
CGTGCACCGC ACCATCAGCA CTCCCACGCC GCTGCCCGCG GACCGGGCCA GCCTGGACCC
CGGCGACCGA ACCGCCGATG CAGAGGAACG GATCGGCTAT CACGCCGAAC TGCTGGCATT
GCAGACACCG GACCTGCACA AGATCGTCTC CACCGGACGA AGCCTGCTGC TGCTGAACCA
CCGCCAGCCC GGTGCCCGCC GCGGGCTACT GGTCAGCGGG GCTCCCACCA CCGGCAAGTC
CACCGCGATC ACCCAGCTGG GCCGGGCCGT CGAGCTGGCC CCGGCGCACC CGCCCCAACC
CGGACGACGG CGCACCGGTC GTGTATCTGA
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| Protein sequence | MADRGPTIAL GQRLVFQERT WTVVAVTGSG VTLQGQSGQV TAVLVTHLVA SDGFEVLDEP
APVPVPPDSL LDGLDQGERD RVRRLERHIG QVDTGVLPGD EDPIRDDRYD LRTTTVNERV
HAKVAELKGT DLAVSVRQLH RLRVAYRADG AIGLVERRVR DRLAGRDPLA AADGRVLTAL
AEAMTGQAAQ STVSRKTTFT RVRAALTAEH GDGLMIPSDR ELYRLAAALD RGRHTFGAAT
TRRTRDNRPD RPFTASVLVR PGEQVQIDTN TIDILCRYPD GVARRAELTM AVDVATRSIL
TGVIAPSTKA VDAVAVLARL LVPQPLRPGW PETLLLAQSV LPFDRLVGID ARFELAQALP
VILPDTLVCD RGSVYMAETF RRACRHLGIS VQPARPYTPT DKATVERTFG SINTLFCRHI
HGYVGSSVAM RGKDPAAEAV FTLAQLQDLF DEWVVAVWQN RPHESLTTVW GENRPVSPNE
AYAAMVARSG YVPIPRSTAD YVELLPGEWR RINEEGVTLH NRVYDSAELN PYRRADSGVT
AQNGRWELHH DPYDITQIWI RNHHSAGWIT LPGCTGTWSG NRSARRSTKT SGRAASPPAN
LSGTTTSPAG SPSCSGTRTG PANHRRTGGS WRRRRTRPRG RQYPHRRRAP RLQTTTGPTR
GWPASTRTLT RRPPSARKAT TAGTVCWPGS ECSTRPPATG VCGDGAAGRP ADQPDRVASV
RAPHHQHSHA AARGPGQPGP RRPNRRCRGT DRLSRRTAGI ADTGPAQDRL HRTKPAAAEP
PPARCPPRAT GQRGSHHRQV HRDHPAGPGR RAGPGAPAPT RTTAHRSCI
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