| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2396 |
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| Symbol | |
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| ID | 8448007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2645117 |
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| End bp | 2646208 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645041515 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003201759 |
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| Protein GI | 258652603 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000296074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0001884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCCGCTT CGTTCCGGGC GGGCAACCCG CATCAGCAGA TCAGGTTCTG CCGGGCCGCC
GACGGTGTGC GCATCGCCTA TGCGGTGCAT GGCACCGGCC CCCCGTTGCT GATCTCCACC
TGCTGGCTCT CCCATCTGCA GCACGATTGG GAGAGCCCGG TCTGGCGGCA CTTCCTGTCC
GACCTCGGCG AGTTTGCGAC CGTGATCCGG TTCGACGAGC GGGGCCACGG CCTGTCCGAT
TGGGACGTCA CCGACTTCTC GCTTGAGGCT CGGCTCGGAG ATCTGGCGGC CGTCGCCGAC
GACGCCGGCT TTCCCACGTT CGCGCTGATG GCGATGGCGC AAGGGGGTCC GGTGGCGATC
ACGTACGCGC ACCGGTACCC GGGCCGGGTC ACCCGGCTGG TGTTCTACGA CAGCTACGCC
GACCCGCTGC ACGGCATGAC CGACGACGAC ATCGAGCTGG AGGACGCGTT CGAGCACATC
ATCAAGGCGG GCTGGGGCCG GCCGGAGAGC ACCTTCCGGC GAGTGTTCAG CACGCAGATG
ATCCCGGACG CGACCGAGGA GCAGCTCGGC TGGCTGGACG AGCTGCTCCG GGTGTCGGTG
TCCCCGCGCA CCGCTGTGCT CGCCCGGCAA CAACGCAAGG GGGCCGACGC CAGTGCCCTG
ATGCCGCAGC TGACGGCACC CACCCTGGTC CTGCATTCGT TGCGGGACCG GATGAACAGC
TTCGCGCACG CGCGCCATCT GTCGACCGGC ATCCCCGGCG CCCGGCTGGT GCCGCTGGAC
AGCGGCAACC ACATCCTGCT GGCCGACGAA CCGGCCTGGC CACAGTTCGT CACCGCGGTG
CGCGATTTCC TCGCCGACGA CCGCGAGTCC GCCCCGGCCC CGGCGAGAGT GCCGCTGGCC
CAGGTGCTCT CCGGTCGCGA ACTGCAGGTG TTGGGCCTGG CGGCGCAGGG CCGGGACAAC
GACGAGATCG CCCGCCGCCT CACGCTGAGC GTGCGCACCG TCGAACGGCA CCTGCAGAAC
ATCTACGCGA AGCTGGAGGT GCAGGGAAAG TCGGCCCGCA CGGCCGCGGT CGCCCGATTG
CTGTCCGGCT GA
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| Protein sequence | MPASFRAGNP HQQIRFCRAA DGVRIAYAVH GTGPPLLIST CWLSHLQHDW ESPVWRHFLS
DLGEFATVIR FDERGHGLSD WDVTDFSLEA RLGDLAAVAD DAGFPTFALM AMAQGGPVAI
TYAHRYPGRV TRLVFYDSYA DPLHGMTDDD IELEDAFEHI IKAGWGRPES TFRRVFSTQM
IPDATEEQLG WLDELLRVSV SPRTAVLARQ QRKGADASAL MPQLTAPTLV LHSLRDRMNS
FAHARHLSTG IPGARLVPLD SGNHILLADE PAWPQFVTAV RDFLADDRES APAPARVPLA
QVLSGRELQV LGLAAQGRDN DEIARRLTLS VRTVERHLQN IYAKLEVQGK SARTAAVARL
LSG
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