| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2369 |
|---|
| Symbol | |
|---|
| ID | 8447980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2610991 |
|---|
| End bp | 2612049 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645041489 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003201733 |
|---|
| Protein GI | 258652577 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000342435 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000116263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGGGA TCGAGGAGCA GGACGTCCGG ACCGCCACGG TGGCCGGCAG CACCCTGGCG
TATGCCGTCG TCGGCACCGG CCCAACCGTC CTGTTCTGCG GCTGGTGGTG CAGCCACCTG
AGCCTGAACT GGCACGATCC GCTCTTCCGG CAGTTCGTGT CCCGGCTGGC CCAGCGGCAC
ACGATCATCC GGTACGACCG CCCGGGCACC GGGCTGTCCG GGTCGGCGGG GACCCCACCG
CACACCGTCG ACGACGAGGT CGCCGTGTTG GCCGGCGTGA TCGACGCGCT GGCGCCGGGC
CGGTTCGATC TGGTCGGGGC CTCGTCCGGG GCGGCGGCCG CGATCGCCTA CGCGGCCGAC
CAGCCGGACC GGGTCGGCCG GCTCGTGCTG TACGGCGGCT TCGCACGGGG GGCCGAGCTC
GCCTCACCGG CGGCCCGGGC GGCCCTGCTG GAGGTGATCG GCAGCCATTG GGGGCTGGGG
TCCCGGCTGT TGGCCGACCT GTTCGTGCCG GGGTCGTCGG GACCGGAGCA GGATGCGTTC
GCCGCCTTCC AGCGCCGGTC GGCCACCCGG GAGCAGGCCG CCGAATCGCT CGCCGCCAGC
TATGCCGTGG ACGTGACCGC CGAGCTGGCC CGGGTCCGCG CGCCGACCAG TGTGCTGCAC
CGGCGGCAGG ACCGGGCGGT GCCGTTCGCG CTGGGTGCCG ATCTGGCCCG GCGGATCCCG
GGTGCGTCCC TGACGGCGCT GGACGGGGTC GATCACTTTC CCTGGCGGGG TGACGCCGAT
GCGGTGGCCG ACGCGATGCT GCGAGGCCTG GGCCACCACG TCCCGCCCCG ACCCCACGCC
ACCGGGCCGG ATGCGATCAC CGAGCGGGAA CGCGAGATCC TGGCGCTGGT CGCCGAGGGG
CTGACCGACC CGCAGATCGC GCAGCGGCTG GTGGTCAGCC CGCACACCGT TCACCGGCAC
ATCGCCAACG CCCGGGTCAA ACTCGGGGTC CGCTCGCGGG CCGCAGCGGC GGCGACCCTG
GCCCGCCGGT CGGGCGCCCC ACCGGCGGCC GGATCGTGA
|
|---|
| Protein sequence | MLGIEEQDVR TATVAGSTLA YAVVGTGPTV LFCGWWCSHL SLNWHDPLFR QFVSRLAQRH
TIIRYDRPGT GLSGSAGTPP HTVDDEVAVL AGVIDALAPG RFDLVGASSG AAAAIAYAAD
QPDRVGRLVL YGGFARGAEL ASPAARAALL EVIGSHWGLG SRLLADLFVP GSSGPEQDAF
AAFQRRSATR EQAAESLAAS YAVDVTAELA RVRAPTSVLH RRQDRAVPFA LGADLARRIP
GASLTALDGV DHFPWRGDAD AVADAMLRGL GHHVPPRPHA TGPDAITERE REILALVAEG
LTDPQIAQRL VVSPHTVHRH IANARVKLGV RSRAAAAATL ARRSGAPPAA GS
|
|---|
| |