Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2355 |
Symbol | |
ID | 8447966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2594851 |
End bp | 2595840 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 645041475 |
Product | von Willebrand factor type A |
Protein accession | YP_003201719 |
Protein GI | 258652563 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000782033 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00910563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGCCG ATTCGCCGCT GCGCCGGCCC GGCCGTCGGC CGGCCACGTC GCGCTCACCC CTGCGGCGCC GGCCCAAGCA ACTGACCAGC CCGCCGACCG TGTTCGTCCC GGTCGGGGGC GGCGGCACCG GCCTGGTCTG GGGCGCCCGG CCCGGCGGAT CGCCCCACTC GCCCACCCCG GCCGGCGGTT CGGCGCCGGG CCTGACCGAC GAGACCGCCC GCGTGGTCGA CGCCGCCGAC CTGGTCGGCG GTCGCCGCGA GCACGAGGCG GCGGTCCGGG CGCAGGCCCG GCAGATCGCC GCCCGCCTGT CCGTGCCCCT GCCCCGGCAC GACGCGTCGG CCCGGCGCGG GGCAGGCAGC CTGGCCAGCC TGCCCTACCG GGGCGGCGCG GACGAGATCG ATCTGGACCG CACCATCGAG GTCCTGGCCG AACGCCCGGT GCCCGACGAC GAGGACATCG TGGTCCGCGA TCGGGTCCGC ACCCGGCGGT CGGTGGTCCT GGTCGTGGAC GTGTCCGGGT CGATGCGCGG TGAGCGGGTC CGCACGGCCG CGGCGACCGT CGCCGCGCTG GCCGCCGAAC TGCACCGGGA TCACCTGGCG GTCATCGCCT TCTGGTCCGA CGCCGCCGTG GTGGCACCAC TCGGGGCCCC GGTCCGGCCG CTGGATCTGC TTGACCGGAT CCTGGCCCTG CCGGCCCGCG GCCTGACCAA CGTGGCCTTC CCGTTGCAGC TGGCCGGCGA GCAGCTGGCC CGGGTGCCGG TGCGGGACGC GCGGGTGGTG CTGCTGTCCG ACTGCGTGCA CAACGCCGGC CCCGATCCCC GAATCGAGGC TGCTCGGCTG CCGAGAGTGG ATGTACTGCT GGATGTCTCG GGCGAGAACG ACCGGGAACT GGGTCGCCAG CTGGCCCGGT CCGGCCGCGG CCGGCTCGCC CCGATCCGCA CCTACCGCGA CGTCGCGCCG GCACTGCGAT CGGCATTCGG CGACCGCTGA
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Protein sequence | MAADSPLRRP GRRPATSRSP LRRRPKQLTS PPTVFVPVGG GGTGLVWGAR PGGSPHSPTP AGGSAPGLTD ETARVVDAAD LVGGRREHEA AVRAQARQIA ARLSVPLPRH DASARRGAGS LASLPYRGGA DEIDLDRTIE VLAERPVPDD EDIVVRDRVR TRRSVVLVVD VSGSMRGERV RTAAATVAAL AAELHRDHLA VIAFWSDAAV VAPLGAPVRP LDLLDRILAL PARGLTNVAF PLQLAGEQLA RVPVRDARVV LLSDCVHNAG PDPRIEAARL PRVDVLLDVS GENDRELGRQ LARSGRGRLA PIRTYRDVAP ALRSAFGDR
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