| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2348 |
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| Symbol | |
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| ID | 8447959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2588756 |
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| End bp | 2589784 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041469 |
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| Product | Haloacid dehalogenase domain protein hydrolase |
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| Protein accession | YP_003201713 |
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| Protein GI | 258652557 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000426871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00437395 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTTGACG CCGATCGCCC GCCGGTGCGG GCGGTGATCT TCGACCTGGA CGGCACCCTG
GTCCAGACCC GGATTGCGTC CTGGGAGATC TTCGCGCGCA TCAACGATCG CTTCGAGCTC
GGCGTGGACC GGCCGGAGAA GTACTTCGAG CTGTTCAACG GCAACGTGTT TCGCTCCATC
CGCAAGCTGT GCCGGGACGA CGCACAGGCG CAGCAGGTGA ACGCGGCCTT CCTGGAGCTG
CTGCGCACCG AGTACACGCC GCCGCTGGTA CCCGGCATGG CCGAGGTGGT CCGGCGATTG
GCCACCGACT GCACCCTGGC CGTCATGTCG TCCAACGCGA TGGCGGTGCT GCGCCGGGTG
CTGGTGGCCA ACGATCTGGC CTTCTGCTTC GCCCACGTCT TCGGGGGCGA TATCGCCCCG
GACAAGAAGA CGGCCATGCG CAGCTTCCTG GCCGACGCCG GCAACGGCTA CGGCCGCCGG
TGCGCCGCCG ACTACGACGA GGCCGCCACC CGGCGCGACG CCGACCCGGC CAGCACCGTG
CTGGTCACCG ACACCGCCGG CGACGTCAAG GACGCGCTCG CGGTGGGTAT CCGCGCGGTC
GGGGTGGCCT GGGGCATGCA TTCGGTCGAC GAGTTGACCC GGGCCGGGGC CGAGTTCGTC
GCGCTGTGGC CGCAGGAGCT GGGCGCGCAC ATCCTGGGCG ACGAGGCGGC CCGACCGCCG
CGGGGCGCGT GCGCGGTGCC GGCCGTGCAT CCGGCTCGCG GACCCGAGGC CGTCCGCCCC
ACCACCCCGG CCTCGGGTTG CGGGTGTGGC TGCAGCGGAA AAGACTGCCC GGTCAAGGAC
TTCGTGGTCG GTGACGATCC GGTGCGGCGG GCGGCGGCCA TCCGTCGCCG CCGCCGGCAG
GGCAGTGCTC CGGTCTCGGC CCCGGCCTCG ACCCCGGCCG GCGCCCTGCC ACCGGGGCCG
GGGCGACCGT CCGGGCCGCC CCCGGCCGAC GAGTTGCTGC AGGCGGTGCG CCGGGTCTGC
CGTGCCTGA
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| Protein sequence | MVDADRPPVR AVIFDLDGTL VQTRIASWEI FARINDRFEL GVDRPEKYFE LFNGNVFRSI
RKLCRDDAQA QQVNAAFLEL LRTEYTPPLV PGMAEVVRRL ATDCTLAVMS SNAMAVLRRV
LVANDLAFCF AHVFGGDIAP DKKTAMRSFL ADAGNGYGRR CAADYDEAAT RRDADPASTV
LVTDTAGDVK DALAVGIRAV GVAWGMHSVD ELTRAGAEFV ALWPQELGAH ILGDEAARPP
RGACAVPAVH PARGPEAVRP TTPASGCGCG CSGKDCPVKD FVVGDDPVRR AAAIRRRRRQ
GSAPVSAPAS TPAGALPPGP GRPSGPPPAD ELLQAVRRVC RA
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