| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2314 |
|---|
| Symbol | |
|---|
| ID | 8447925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2555731 |
|---|
| End bp | 2556585 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645041435 |
|---|
| Product | pantoate/beta-alanine ligase |
|---|
| Protein accession | YP_003201679 |
|---|
| Protein GI | 258652523 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000496833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000102893 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TCCGGACCGT CCCCGACCTG CGTGAGCTGC TGCGTCCCTA CCGGGGGGAG
GGCTCCGTCG GGTTCGTGCC GACCATGGGT GCCTTGCACG AAGGGCACCT GGAGCTGGCC
CGGCGCGCCC GCGCGGCCGA CGACGTGGTC GTGATGTCGA TCTTCGTCAA TCCGACCCAG
TTCAACGATC CCGCCGATCT GGCCGCCTAT CCGCGCGACG AGCACAAGGA CGCCGAACTG
GCCGCCTCGG CGGGGGTGGA CGTGCTCTTC GCCCCCGGCG TGGCCGAGGT CTACCCGCCC
GGATTCACCG CCACGGTCAG CCTGCACGGG CCGATCGTCG AGGCGTTGGA GGGGGCGCAC
CGCGGGGTCG GTCACTTCCA GGGGGTGACC ACGGTGGTCA GCAAGCTGTT CGGCATGGTC
TCGCCCGACC GGGCCTATTT CGGCCAGAAG GACGCCCAGC AGGTGCGGGT GGTCCGGGCG
ATGGTGGCCG ATCTGAACAT TCCCACCGAG ATCGTCGTCG TGCCCACGGT CCGGGAGCCC
GACGGGATGG CCATGTCCAG CCGCAACCGG CGGCTGAGCC CGTTCGAACG GGCCCGTGCG
GCGCACATCT CGGCGGCCCT GTGGGAGGCC GAGGTGGCCG TGGCCAACGG CATCGTCGAC
GCCGGGGCGG TGGTGCAGGT TGCTCGAAAG GTGCTGTCCG ACAACGCCAT TGACGTGGAA
TACCTCGAGC TGGTGGACGC CGACACCTTC CTGCCGGTCC GGGTGCTCGT CGCCGGCCCG
GCGCTGCTCG CCGTCGCCGC AGTGATCGGC GGCGTACGCC TGATCGACAA CGTGGTGCTG
CACCCCCGCG CCTGA
|
|---|
| Protein sequence | MKIVRTVPDL RELLRPYRGE GSVGFVPTMG ALHEGHLELA RRARAADDVV VMSIFVNPTQ
FNDPADLAAY PRDEHKDAEL AASAGVDVLF APGVAEVYPP GFTATVSLHG PIVEALEGAH
RGVGHFQGVT TVVSKLFGMV SPDRAYFGQK DAQQVRVVRA MVADLNIPTE IVVVPTVREP
DGMAMSSRNR RLSPFERARA AHISAALWEA EVAVANGIVD AGAVVQVARK VLSDNAIDVE
YLELVDADTF LPVRVLVAGP ALLAVAAVIG GVRLIDNVVL HPRA
|
|---|
| |