| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2284 |
|---|
| Symbol | |
|---|
| ID | 8447895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2519020 |
|---|
| End bp | 2520240 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645041406 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003201650 |
|---|
| Protein GI | 258652494 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00112442 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00386241 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGA CGAAATCCGG GCAGCCGAGC GAGCCGGTCG CGCACCATCC GCGGGTCGGA
CAGCCGCACG ACGCCGCCGC GGAGGGTCCG ATTGCCCAGG CCGAGGCGGT CGCCGCCACG
CTGCGCACGC CGGCCGACCC GCTCGGGCCG CTGGGCCGCC GGCTGAACTG GCGCTCGGCC
TTCCTGATCG GGCTGGCCGC CACCGCCGGG GTCGCGGTGA CGGTCGGGAT CATCCAGATG
CTGCTGCTGG CCGGTCAGGT GCTGCTGCTG ATCGCGCTGG CCCTGTTCCT GGCCATCGGC
CTGGAACCGG CCGTGTCCTG GCTGATCACC CACCGTTTCC CGCGCTGGGC CGCGGTGTTC
ACCGTGCTGG CCGGGCTGAC CCTGCTGCTG GCCGGGTTCA TCGCCGCCGC CATCCCGGCC
CTGGTCGAGC AGGGTCGGCG GCTGGTCGAG GCGGCCCCGC AGTACGTGGC CCAACTCAGC
GACGACAGCT CGGCCATCGG CCAGCTCAAC CAGCGCTTCC ACCTGCAGGA GACGGTGCAG
CAGATCGTCG ACGGCGGCGG CCCGGGCCTG GCCTCCGGGG TGATCAGCGT CGGCGAGGCC
GTCTTCGGTG CGTTCTCCGG TCTGCTGGTG GTGGCCGTGC TCACGGTCTA CTTCCTGGCC
GACATGCCCC GCGTGCGCAC CACCCTGTAC CGGTTCATGC CGGCGCCCCG GCGGCCCCGG
GCGATCCTGC TGGGGGACCA GATCATGGTC AAGGTCGGCG GGTACGTGCT GGGCAACGTG
GTCATCTCGG TGATCTCGGC GGTGGTCACC TTCGTCTGGC TGATCGCATT CGGCGTGCCC
TACCCGCTGT TGCTGGCCAT CCTGTTCGCC CTGCTCGACC TGATCCCGGT GATCGGATCG
CTGATCGCCG GAGCCCTGGT CGCCCTGGCC GCGTTCAGCG TGTCGGTGCC GGTCGGGCTG
GCCACCATCG GCTACTTCGT GGCCTACAAG CTGGTCGAGG ACTACCTGCT CACGCCAAAG
GTGTTCGGCC GGGTGCTGCG GATGCCCGCG CTGGTCACCG TCTGCGCGAT CCTCATCGGC
GGCGCCCTGC TCGGGCTGGT CGGCGCGCTC GTCGCGCTGC CCACGGCGGC CGCGATCATG
CTGCTGGTGC AGGAGGTGGT GTTCCCGCGC CTGGATCGCG CCCATGCCAG CGGCGAGCCG
GCAGCTGACC CGGCGGCCTG A
|
|---|
| Protein sequence | MTRTKSGQPS EPVAHHPRVG QPHDAAAEGP IAQAEAVAAT LRTPADPLGP LGRRLNWRSA
FLIGLAATAG VAVTVGIIQM LLLAGQVLLL IALALFLAIG LEPAVSWLIT HRFPRWAAVF
TVLAGLTLLL AGFIAAAIPA LVEQGRRLVE AAPQYVAQLS DDSSAIGQLN QRFHLQETVQ
QIVDGGGPGL ASGVISVGEA VFGAFSGLLV VAVLTVYFLA DMPRVRTTLY RFMPAPRRPR
AILLGDQIMV KVGGYVLGNV VISVISAVVT FVWLIAFGVP YPLLLAILFA LLDLIPVIGS
LIAGALVALA AFSVSVPVGL ATIGYFVAYK LVEDYLLTPK VFGRVLRMPA LVTVCAILIG
GALLGLVGAL VALPTAAAIM LLVQEVVFPR LDRAHASGEP AADPAA
|
|---|
| |