Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2027 |
Symbol | |
ID | 8447636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2238471 |
End bp | 2239193 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645041153 |
Product | isochorismatase hydrolase |
Protein accession | YP_003201399 |
Protein GI | 258652243 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0107803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00287244 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCGACC CCATCACCAT CCCGGCCCAG CCCGGCCCCT TCCCGTTCGA CGTCGCGAGC ACCGCGTTGG TCGTCATCGA CATGCAGCGA GACTTCCTGC TGCCCGGCGG TTTCGGTGAG ACTCTGGGCA ACGACGTCGC CTTGTTGCGC CAGGTCGTCC CCCCACTGGT CGAGCTGCTG GCCGCCGCCC GGGCGGCCGG GATGCTGGTC ATCCACACCA GAGAGGGCCA CGAACCGGAT CTCTCGGACT GCCCACCGGC AAAGTTGCGA CGAGGCAAGC CGTCCGCCCG GATCGGGGAC CCGGGGGCGC TGGGCCGCAT CCTCATCCGG GGTGCGTACG GCCACGACAT CATCGACGAG CTCGCCCCGA TCGCGGGCGA GATCGTCATC GACAAGCCGG GCAAGGGGGC GTTCTACGCC ACCAGCTTCG GGGACGTGCT TGTCGAGCAC GGCATCACCC ACCTGATCGT CACCGGGGTG ACGACCGAGG TGTGCGTGCA CACCACCGTC CGGGAGGCCA ACGACCGCGG GTACGACGCC CTGGTGGTGT CCGACTGCGT CGGTTCCTAC TTCCCGGAGT TCCAGCAGAT AGGCCTGCAG ATGATCGCCG CGCAGGGCGG AATCTTCGGC TGGGTGGCCG ATTCCGCGGC CGTCATCGCC GGGCTGAGCG CCGGAACCGC ACTGGAGACC GCCGGCGCCC CGCACACCGC GCTGGCCGGC TGA
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Protein sequence | MSDPITIPAQ PGPFPFDVAS TALVVIDMQR DFLLPGGFGE TLGNDVALLR QVVPPLVELL AAARAAGMLV IHTREGHEPD LSDCPPAKLR RGKPSARIGD PGALGRILIR GAYGHDIIDE LAPIAGEIVI DKPGKGAFYA TSFGDVLVEH GITHLIVTGV TTEVCVHTTV REANDRGYDA LVVSDCVGSY FPEFQQIGLQ MIAAQGGIFG WVADSAAVIA GLSAGTALET AGAPHTALAG
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