Gene Namu_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1987 
Symbol 
ID8447596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2195716 
End bp2196228 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content73% 
IMG OID645041115 
ProductANTAR domain protein with unknown sensor 
Protein accessionYP_003201361 
Protein GI258652205 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000389014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.118841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCC GTTCTTCCTC CGCCGACGAC TGGGGCGAGC CGGACGATCG CGCCTGCGCG 
CCCGGCCCCG CGGGCCTGCA CGCCGTGCCC AGCGACCGGT CCACCGACGA GGTGATGGAC
CTGATGGCCG CCCTGCAGGG CCGGCTGGCC ACGCTGCCGG TGATCGAGCA GGCCAAGGGC
GCGCTGATGA TGACCTACGG TCTGACCGCC GACGCGGCGT TTGCGGCGCT GCGGGCGCAC
TCGCAGGACC GGAACATCAA GATCCGTGAT CTGGCCGCCG AACTGGTCGG CACCGCGCCG
CATCACCCGT TCGGCGCCCG CGCGCACGGC GACCTGAACC GGTTGCTGAA CGCGGTCACC
GACGATTTTC TGAGGTCGGC CGAAGCCGGT GCCCACCCCA GCACCGCGGC CCTCGGCGCG
CCCGCGAATC CCAATGGGTC CGACTCCCCC ACCGGGCCCG ACGAAGACGA CGCCGGCCCC
GACCGCGCGA GGCGATCGGG ACCGGCGTCG TGA
 
Protein sequence
MMTRSSSADD WGEPDDRACA PGPAGLHAVP SDRSTDEVMD LMAALQGRLA TLPVIEQAKG 
ALMMTYGLTA DAAFAALRAH SQDRNIKIRD LAAELVGTAP HHPFGARAHG DLNRLLNAVT
DDFLRSAEAG AHPSTAALGA PANPNGSDSP TGPDEDDAGP DRARRSGPAS