Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1934 |
Symbol | |
ID | 8447541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2132567 |
End bp | 2133220 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645041064 |
Product | protein of unknown function DUF1707 |
Protein accession | YP_003201312 |
Protein GI | 258652156 |
COG category | [S] Function unknown |
COG ID | [COG4758] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.495223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00146942 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTGCGC ACGCCGATCA GCCCAACGAT CCGGGCCAGC TGCGGGCCTC CGACGACGAC CGGAACGCGG TGGCCCGGAT CCTGCAGACC GCCTCCGACG AGGGCCGGAT CACCCCGGTC GAGCTGCAGG AGCGGCTGGA CACCCTCTAC CGCACCAAGA CGCTGCGGGA GCTGGAACCG CTGACCTGGG ACCTGCCGGG ACACCGCGAG CTGGCGCCGC GGCCGGCGGC GACGCCGGTC TCGCTGAACA AACCGACCGC CGGATCGACG ACCGAGCGGA TCGGCGGGAC CCCGACGTCC AGCGTCGCGA TCGGCATCAT GTCCGGGGCG ACCCGGGCCG GTGCCTGGGT GGTGCCGGCC CAGTTCTCCG CGGTGGCCGT GATGGGTGGG GTCGACATCG ACCTGACCAA GGCCCGTTTC GCCGAGCGTC AGGTCACGAT CACCGCGCTG GCGATCATGG GCGGCATCGA CATCGTCGTC CCGGAGGACG TCACGGTCGT CGTCAACGGC GTTGGGTTGA TGGGTTCGTT CGAGGACAAC GCCCGGACGC CGGGGACCGT CGACGGGCCG GTGGTGCGGA TCAACGGGCT GGCCCTCATG GGCGGCGTCG ACGTGCACCT GCCCAAGGGC ACGCGGACCG AGCGCAACGG TTAG
|
Protein sequence | MTAHADQPND PGQLRASDDD RNAVARILQT ASDEGRITPV ELQERLDTLY RTKTLRELEP LTWDLPGHRE LAPRPAATPV SLNKPTAGST TERIGGTPTS SVAIGIMSGA TRAGAWVVPA QFSAVAVMGG VDIDLTKARF AERQVTITAL AIMGGIDIVV PEDVTVVVNG VGLMGSFEDN ARTPGTVDGP VVRINGLALM GGVDVHLPKG TRTERNG
|
| |