Gene Namu_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1908 
Symbol 
ID8447515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2101199 
End bp2101696 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID645041038 
ProductGPW/gp25 family protein 
Protein accessionYP_003201286 
Protein GI258652130 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00711774 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000781626 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGCATCG ATTCCCGAGT TGACTTCGTG GGCGCCGGCT GGGCGTTCCC GCTGACCACC 
GACGCCACCG GCGGGGTCGC CCTGGTCGTC CGCGAGCAGG AGATCGAGGA GGCCATCCGG
CTGATCCTGG CGACCGCGCC GGGGGAGCGG CCGATGCGTC CCGAGTTCGG CTGCCGGGTG
CACGACCACT TGTTCGCCCC GATCAACGCC TCCACCGCCG GGGCCATCGC CTCCGACGTG
CGCTACGCGC TGGAGATGTG GGAGCCGCGG ATCACCGTGC ACGACGTGCT GATCAGCTTC
GACCAGGCCG ACCTGGGCAC GCTGTACATC GACATCCACT ACTCGATCCG CGGCATCAAC
GATCCGCGGA ACCTGGTCTT CCCGTTCTAC GTGATCCCGG ACGAGCCCGA CTCGGCGGCG
GTCACGGGTC CGTCGTTCGC CCCGGCCTCC CTGCCGGCCA TTCCCGCGGC CCTGGCGGCC
GCCGAGCGGA GGGCCTGA
 
Protein sequence
MGIDSRVDFV GAGWAFPLTT DATGGVALVV REQEIEEAIR LILATAPGER PMRPEFGCRV 
HDHLFAPINA STAGAIASDV RYALEMWEPR ITVHDVLISF DQADLGTLYI DIHYSIRGIN
DPRNLVFPFY VIPDEPDSAA VTGPSFAPAS LPAIPAALAA AERRA